Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trex1Q91XB0 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trex1Q91XB0 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
Trex1Q91XB0 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC14.43□□□□□ -0.1
Trex1Q91XB0 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trex1Q91XB0 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC14.43□□□□□ -0.1
Trex1Q91XB0 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trex1Q91XB0 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC14.43□□□□□ -0.1
Trex1Q91XB0 Gm45638-201ENSMUST00000211507 2878 ntBASIC14.43□□□□□ -0.1
Trex1Q91XB0 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trex1Q91XB0 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC14.43□□□□□ -0.1
Trex1Q91XB0 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trex1Q91XB0 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trex1Q91XB0 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trex1Q91XB0 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trex1Q91XB0 Gm17040-202ENSMUST00000170597 889 ntBASIC14.43□□□□□ -0.1
Trex1Q91XB0 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Trex1Q91XB0 Gm42997-202ENSMUST00000200321 985 ntBASIC14.43□□□□□ -0.1
Trex1Q91XB0 Gm19994-201ENSMUST00000217086 586 ntBASIC14.43□□□□□ -0.1
Trex1Q91XB0 Gm18730-201ENSMUST00000218038 343 ntBASIC14.43□□□□□ -0.1
Trex1Q91XB0 AC159205.5-202ENSMUST00000224849 386 ntBASIC14.43□□□□□ -0.1
Trex1Q91XB0 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trex1Q91XB0 Gm9996-201ENSMUST00000070359 913 ntBASIC14.43□□□□□ -0.1
Trex1Q91XB0 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trex1Q91XB0 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trex1Q91XB0 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trex1Q91XB0 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trex1Q91XB0 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trex1Q91XB0 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trex1Q91XB0 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trex1Q91XB0 Gm13142-201ENSMUST00000117213 1453 ntBASIC14.43□□□□□ -0.1
Trex1Q91XB0 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trex1Q91XB0 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trex1Q91XB0 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trex1Q91XB0 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trex1Q91XB0 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trex1Q91XB0 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trex1Q91XB0 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trex1Q91XB0 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trex1Q91XB0 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trex1Q91XB0 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trex1Q91XB0 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trex1Q91XB0 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC14.42□□□□□ -0.1
Trex1Q91XB0 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trex1Q91XB0 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trex1Q91XB0 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trex1Q91XB0 AC151895.1-201ENSMUST00000219025 1742 ntBASIC14.42□□□□□ -0.1
Trex1Q91XB0 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trex1Q91XB0 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Trex1Q91XB0 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Trex1Q91XB0 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
Trex1Q91XB0 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC14.42□□□□□ -0.1
Trex1Q91XB0 Gm11331-201ENSMUST00000119764 288 ntBASIC14.42□□□□□ -0.1
Trex1Q91XB0 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trex1Q91XB0 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC14.42□□□□□ -0.1
Trex1Q91XB0 Gm20426-201ENSMUST00000173657 440 ntBASIC14.42□□□□□ -0.1
Trex1Q91XB0 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trex1Q91XB0 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC14.42□□□□□ -0.1
Trex1Q91XB0 Gm29615-201ENSMUST00000185371 697 ntBASIC14.42□□□□□ -0.1
Trex1Q91XB0 Gm28224-201ENSMUST00000186078 697 ntBASIC14.42□□□□□ -0.1
Trex1Q91XB0 Gm29001-201ENSMUST00000186177 697 ntBASIC14.42□□□□□ -0.1
Trex1Q91XB0 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC14.42□□□□□ -0.1
Trex1Q91XB0 Gm28292-201ENSMUST00000186593 697 ntBASIC14.42□□□□□ -0.1
Trex1Q91XB0 Gm28101-201ENSMUST00000187608 697 ntBASIC14.42□□□□□ -0.1
Trex1Q91XB0 Gm29076-201ENSMUST00000187689 697 ntBASIC14.42□□□□□ -0.1
Trex1Q91XB0 Gm28302-201ENSMUST00000187931 697 ntBASIC14.42□□□□□ -0.1
Trex1Q91XB0 Gm28646-201ENSMUST00000188220 697 ntBASIC14.42□□□□□ -0.1
Trex1Q91XB0 Gm28205-201ENSMUST00000189177 697 ntBASIC14.42□□□□□ -0.1
Trex1Q91XB0 Gm29032-201ENSMUST00000189797 697 ntBASIC14.42□□□□□ -0.1
Trex1Q91XB0 Gm28695-201ENSMUST00000190300 697 ntBASIC14.42□□□□□ -0.1
Trex1Q91XB0 Gm37448-201ENSMUST00000192795 697 ntBASIC14.42□□□□□ -0.1
Trex1Q91XB0 Gm44136-201ENSMUST00000203819 1106 ntBASIC14.42□□□□□ -0.1
Trex1Q91XB0 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trex1Q91XB0 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC14.42□□□□□ -0.1
Trex1Q91XB0 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trex1Q91XB0 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trex1Q91XB0 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trex1Q91XB0 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trex1Q91XB0 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trex1Q91XB0 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trex1Q91XB0 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Trex1Q91XB0 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trex1Q91XB0 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trex1Q91XB0 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trex1Q91XB0 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trex1Q91XB0 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trex1Q91XB0 Gm43721-201ENSMUST00000199677 2313 ntBASIC14.42□□□□□ -0.1
Trex1Q91XB0 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC14.42□□□□□ -0.1
Trex1Q91XB0 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trex1Q91XB0 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trex1Q91XB0 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC14.42□□□□□ -0.1
Trex1Q91XB0 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trex1Q91XB0 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trex1Q91XB0 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trex1Q91XB0 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trex1Q91XB0 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trex1Q91XB0 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Trex1Q91XB0 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trex1Q91XB0 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trex1Q91XB0 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms