Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC13.51□□□□□ -0.25
TraipQ8VIG6 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC13.51□□□□□ -0.25
TraipQ8VIG6 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
TraipQ8VIG6 Gm5363-201ENSMUST00000211927 938 ntBASIC13.51□□□□□ -0.25
TraipQ8VIG6 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TraipQ8VIG6 AC154765.1-201ENSMUST00000217732 439 ntTSL 3 BASIC13.51□□□□□ -0.25
TraipQ8VIG6 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TraipQ8VIG6 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TraipQ8VIG6 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TraipQ8VIG6 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TraipQ8VIG6 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TraipQ8VIG6 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
TraipQ8VIG6 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TraipQ8VIG6 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
TraipQ8VIG6 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TraipQ8VIG6 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
TraipQ8VIG6 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.51□□□□□ -0.25
TraipQ8VIG6 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TraipQ8VIG6 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TraipQ8VIG6 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TraipQ8VIG6 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TraipQ8VIG6 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
TraipQ8VIG6 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.5□□□□□ -0.25
TraipQ8VIG6 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TraipQ8VIG6 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.5□□□□□ -0.25
TraipQ8VIG6 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TraipQ8VIG6 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
TraipQ8VIG6 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC13.5□□□□□ -0.25
TraipQ8VIG6 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13.5□□□□□ -0.25
TraipQ8VIG6 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TraipQ8VIG6 Retreg1-206ENSMUST00000228306 1430 ntBASIC13.5□□□□□ -0.25
TraipQ8VIG6 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
TraipQ8VIG6 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
TraipQ8VIG6 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TraipQ8VIG6 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TraipQ8VIG6 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.5□□□□□ -0.25
TraipQ8VIG6 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
TraipQ8VIG6 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
TraipQ8VIG6 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC13.5□□□□□ -0.25
TraipQ8VIG6 Gm14644-201ENSMUST00000116671 647 ntBASIC13.5□□□□□ -0.25
TraipQ8VIG6 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TraipQ8VIG6 Gm26361-201ENSMUST00000158868 186 ntBASIC13.5□□□□□ -0.25
TraipQ8VIG6 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TraipQ8VIG6 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC13.5□□□□□ -0.25
TraipQ8VIG6 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TraipQ8VIG6 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TraipQ8VIG6 Gm18304-201ENSMUST00000189162 546 ntBASIC13.5□□□□□ -0.25
TraipQ8VIG6 CT030182.1-201ENSMUST00000225935 533 ntBASIC13.5□□□□□ -0.25
TraipQ8VIG6 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TraipQ8VIG6 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TraipQ8VIG6 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TraipQ8VIG6 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
TraipQ8VIG6 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TraipQ8VIG6 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TraipQ8VIG6 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
TraipQ8VIG6 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TraipQ8VIG6 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.49□□□□□ -0.25
TraipQ8VIG6 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TraipQ8VIG6 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
TraipQ8VIG6 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
TraipQ8VIG6 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
TraipQ8VIG6 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TraipQ8VIG6 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TraipQ8VIG6 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC13.49□□□□□ -0.25
TraipQ8VIG6 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
TraipQ8VIG6 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TraipQ8VIG6 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TraipQ8VIG6 Gm13996-201ENSMUST00000118456 430 ntBASIC13.49□□□□□ -0.25
TraipQ8VIG6 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC13.49□□□□□ -0.25
TraipQ8VIG6 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC13.49□□□□□ -0.25
TraipQ8VIG6 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TraipQ8VIG6 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
TraipQ8VIG6 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC13.49□□□□□ -0.25
TraipQ8VIG6 Rprl1-202ENSMUST00000198476 238 ntBASIC13.49□□□□□ -0.25
TraipQ8VIG6 AC166344.1-202ENSMUST00000224139 234 ntBASIC13.49□□□□□ -0.25
TraipQ8VIG6 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC13.49□□□□□ -0.25
TraipQ8VIG6 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TraipQ8VIG6 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TraipQ8VIG6 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TraipQ8VIG6 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
TraipQ8VIG6 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
TraipQ8VIG6 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
TraipQ8VIG6 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
TraipQ8VIG6 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TraipQ8VIG6 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TraipQ8VIG6 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.49□□□□□ -0.25
TraipQ8VIG6 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TraipQ8VIG6 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TraipQ8VIG6 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TraipQ8VIG6 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TraipQ8VIG6 AC122197.2-201ENSMUST00000219196 1635 ntBASIC13.49□□□□□ -0.25
TraipQ8VIG6 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC13.49□□□□□ -0.25
TraipQ8VIG6 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TraipQ8VIG6 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TraipQ8VIG6 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TraipQ8VIG6 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
TraipQ8VIG6 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TraipQ8VIG6 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TraipQ8VIG6 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TraipQ8VIG6 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms