Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm1Q8VC85 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm1Q8VC85 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Lsm1Q8VC85 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm1Q8VC85 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Lsm1Q8VC85 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm1Q8VC85 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm1Q8VC85 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC12.13□□□□□ -0.47
Lsm1Q8VC85 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm1Q8VC85 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Lsm1Q8VC85 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.13□□□□□ -0.47
Lsm1Q8VC85 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.13□□□□□ -0.47
Lsm1Q8VC85 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
Lsm1Q8VC85 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm1Q8VC85 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Lsm1Q8VC85 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm1Q8VC85 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm1Q8VC85 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm1Q8VC85 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Lsm1Q8VC85 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.13□□□□□ -0.47
Lsm1Q8VC85 Gm15703-201ENSMUST00000120250 880 ntBASIC12.13□□□□□ -0.47
Lsm1Q8VC85 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm1Q8VC85 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Lsm1Q8VC85 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm1Q8VC85 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.13□□□□□ -0.47
Lsm1Q8VC85 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.13□□□□□ -0.47
Lsm1Q8VC85 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.13□□□□□ -0.47
Lsm1Q8VC85 Gm6745-201ENSMUST00000199216 526 ntBASIC12.13□□□□□ -0.47
Lsm1Q8VC85 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.13□□□□□ -0.47
Lsm1Q8VC85 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Lsm1Q8VC85 Gm10146-201ENSMUST00000072739 309 ntBASIC12.13□□□□□ -0.47
Lsm1Q8VC85 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm1Q8VC85 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.13□□□□□ -0.47
Lsm1Q8VC85 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm1Q8VC85 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm1Q8VC85 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm1Q8VC85 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm1Q8VC85 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Lsm1Q8VC85 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.13□□□□□ -0.47
Lsm1Q8VC85 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm1Q8VC85 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm1Q8VC85 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm1Q8VC85 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm1Q8VC85 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm1Q8VC85 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm1Q8VC85 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm1Q8VC85 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm1Q8VC85 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm1Q8VC85 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Lsm1Q8VC85 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm1Q8VC85 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.12□□□□□ -0.47
Lsm1Q8VC85 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm1Q8VC85 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.12□□□□□ -0.47
Lsm1Q8VC85 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm1Q8VC85 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm1Q8VC85 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
Lsm1Q8VC85 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.12□□□□□ -0.47
Lsm1Q8VC85 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm1Q8VC85 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.12□□□□□ -0.47
Lsm1Q8VC85 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm1Q8VC85 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm1Q8VC85 Mir1894-201ENSMUST00000122802 81 ntBASIC12.12□□□□□ -0.47
Lsm1Q8VC85 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm1Q8VC85 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.12□□□□□ -0.47
Lsm1Q8VC85 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm1Q8VC85 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm1Q8VC85 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm1Q8VC85 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.12□□□□□ -0.47
Lsm1Q8VC85 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.12□□□□□ -0.47
Lsm1Q8VC85 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Lsm1Q8VC85 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.12□□□□□ -0.47
Lsm1Q8VC85 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm1Q8VC85 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm1Q8VC85 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm1Q8VC85 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm1Q8VC85 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm1Q8VC85 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm1Q8VC85 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm1Q8VC85 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm1Q8VC85 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.12□□□□□ -0.47
Lsm1Q8VC85 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.12□□□□□ -0.47
Lsm1Q8VC85 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm1Q8VC85 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.11□□□□□ -0.47
Lsm1Q8VC85 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.11□□□□□ -0.47
Lsm1Q8VC85 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm1Q8VC85 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm1Q8VC85 Gm43868-201ENSMUST00000205187 2114 ntBASIC12.11□□□□□ -0.47
Lsm1Q8VC85 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm1Q8VC85 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm1Q8VC85 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.11□□□□□ -0.47
Lsm1Q8VC85 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm1Q8VC85 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Lsm1Q8VC85 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm1Q8VC85 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm1Q8VC85 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm1Q8VC85 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm1Q8VC85 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.11□□□□□ -0.47
Lsm1Q8VC85 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm1Q8VC85 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm1Q8VC85 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms