Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Gm44397-201ENSMUST00000195950 113 ntBASIC10.29□□□□□ -0.76
Nup35Q8R4R6 Gm42599-201ENSMUST00000201308 469 ntBASIC10.29□□□□□ -0.76
Nup35Q8R4R6 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nup35Q8R4R6 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC10.29□□□□□ -0.76
Nup35Q8R4R6 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nup35Q8R4R6 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Nup35Q8R4R6 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Nup35Q8R4R6 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nup35Q8R4R6 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nup35Q8R4R6 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC10.29□□□□□ -0.76
Nup35Q8R4R6 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Nup35Q8R4R6 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nup35Q8R4R6 AC154517.2-201ENSMUST00000220829 2458 ntBASIC10.29□□□□□ -0.76
Nup35Q8R4R6 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Nup35Q8R4R6 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Nup35Q8R4R6 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nup35Q8R4R6 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Nup35Q8R4R6 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nup35Q8R4R6 AC154527.2-201ENSMUST00000225256 1466 ntBASIC10.29□□□□□ -0.76
Nup35Q8R4R6 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC10.29□□□□□ -0.76
Nup35Q8R4R6 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Nup35Q8R4R6 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nup35Q8R4R6 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Nup35Q8R4R6 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nup35Q8R4R6 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nup35Q8R4R6 Ptprm-203ENSMUST00000224091 3773 ntBASIC10.28□□□□□ -0.76
Nup35Q8R4R6 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nup35Q8R4R6 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nup35Q8R4R6 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nup35Q8R4R6 Gm15544-201ENSMUST00000118776 1531 ntBASIC10.28□□□□□ -0.76
Nup35Q8R4R6 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Nup35Q8R4R6 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC10.28□□□□□ -0.76
Nup35Q8R4R6 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nup35Q8R4R6 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nup35Q8R4R6 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nup35Q8R4R6 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Nup35Q8R4R6 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
Nup35Q8R4R6 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Nup35Q8R4R6 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC10.28□□□□□ -0.76
Nup35Q8R4R6 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Nup35Q8R4R6 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC10.28□□□□□ -0.76
Nup35Q8R4R6 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Nup35Q8R4R6 Gm27989-201ENSMUST00000184721 107 ntBASIC10.28□□□□□ -0.76
Nup35Q8R4R6 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Nup35Q8R4R6 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Nup35Q8R4R6 Gm28693-202ENSMUST00000190758 331 ntBASIC10.28□□□□□ -0.76
Nup35Q8R4R6 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC10.28□□□□□ -0.76
Nup35Q8R4R6 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC10.28□□□□□ -0.76
Nup35Q8R4R6 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nup35Q8R4R6 Gm6983-201ENSMUST00000214912 628 ntBASIC10.28□□□□□ -0.76
Nup35Q8R4R6 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nup35Q8R4R6 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nup35Q8R4R6 Gm16372-201ENSMUST00000073088 450 ntBASIC10.28□□□□□ -0.76
Nup35Q8R4R6 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Nup35Q8R4R6 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Nup35Q8R4R6 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC10.28□□□□□ -0.76
Nup35Q8R4R6 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nup35Q8R4R6 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Nup35Q8R4R6 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nup35Q8R4R6 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nup35Q8R4R6 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nup35Q8R4R6 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Nup35Q8R4R6 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nup35Q8R4R6 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nup35Q8R4R6 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC10.28□□□□□ -0.76
Nup35Q8R4R6 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nup35Q8R4R6 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nup35Q8R4R6 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC10.28□□□□□ -0.76
Nup35Q8R4R6 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nup35Q8R4R6 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC10.28□□□□□ -0.76
Nup35Q8R4R6 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Nup35Q8R4R6 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nup35Q8R4R6 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Nup35Q8R4R6 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.76
Nup35Q8R4R6 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Nup35Q8R4R6 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Nup35Q8R4R6 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Nup35Q8R4R6 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Nup35Q8R4R6 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Nup35Q8R4R6 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Nup35Q8R4R6 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC10.27□□□□□ -0.76
Nup35Q8R4R6 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nup35Q8R4R6 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Nup35Q8R4R6 Gm12539-201ENSMUST00000121549 1098 ntBASIC10.27□□□□□ -0.77
Nup35Q8R4R6 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nup35Q8R4R6 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nup35Q8R4R6 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Nup35Q8R4R6 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Nup35Q8R4R6 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC10.27□□□□□ -0.77
Nup35Q8R4R6 Gm24694-201ENSMUST00000180054 110 ntBASIC10.27□□□□□ -0.77
Nup35Q8R4R6 Gm27663-201ENSMUST00000184839 110 ntBASIC10.27□□□□□ -0.77
Nup35Q8R4R6 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC10.27□□□□□ -0.77
Nup35Q8R4R6 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC10.27□□□□□ -0.77
Nup35Q8R4R6 AC166051.1-201ENSMUST00000214313 210 ntBASIC10.27□□□□□ -0.77
Nup35Q8R4R6 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Nup35Q8R4R6 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nup35Q8R4R6 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nup35Q8R4R6 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Nup35Q8R4R6 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nup35Q8R4R6 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC10.27□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms