Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cd109Q8R422 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Cd109Q8R422 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cd109Q8R422 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC17.74■□□□□ 0.43
Cd109Q8R422 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cd109Q8R422 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC17.74■□□□□ 0.43
Cd109Q8R422 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cd109Q8R422 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cd109Q8R422 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cd109Q8R422 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC17.74■□□□□ 0.43
Cd109Q8R422 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cd109Q8R422 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cd109Q8R422 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cd109Q8R422 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cd109Q8R422 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cd109Q8R422 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC17.73■□□□□ 0.43
Cd109Q8R422 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Cd109Q8R422 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cd109Q8R422 Gm11509-201ENSMUST00000117358 325 ntBASIC17.73■□□□□ 0.43
Cd109Q8R422 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cd109Q8R422 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC17.73■□□□□ 0.43
Cd109Q8R422 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Cd109Q8R422 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC17.73■□□□□ 0.43
Cd109Q8R422 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
Cd109Q8R422 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC17.73■□□□□ 0.43
Cd109Q8R422 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC17.73■□□□□ 0.43
Cd109Q8R422 Gm44126-201ENSMUST00000204831 514 ntBASIC17.73■□□□□ 0.43
Cd109Q8R422 Gm10109-202ENSMUST00000206890 1211 ntBASIC17.73■□□□□ 0.43
Cd109Q8R422 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC17.73■□□□□ 0.43
Cd109Q8R422 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
Cd109Q8R422 AC159819.2-201ENSMUST00000216151 342 ntBASIC17.73■□□□□ 0.43
Cd109Q8R422 CT571245.2-201ENSMUST00000218421 305 ntBASIC17.73■□□□□ 0.43
Cd109Q8R422 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cd109Q8R422 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cd109Q8R422 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cd109Q8R422 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cd109Q8R422 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cd109Q8R422 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cd109Q8R422 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Cd109Q8R422 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC17.73■□□□□ 0.43
Cd109Q8R422 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cd109Q8R422 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC17.73■□□□□ 0.43
Cd109Q8R422 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Cd109Q8R422 Gm7049-201ENSMUST00000223520 1712 ntBASIC17.73■□□□□ 0.43
Cd109Q8R422 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cd109Q8R422 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cd109Q8R422 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cd109Q8R422 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cd109Q8R422 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cd109Q8R422 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cd109Q8R422 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cd109Q8R422 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cd109Q8R422 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cd109Q8R422 Gm25881-201ENSMUST00000157783 103 ntBASIC17.72■□□□□ 0.43
Cd109Q8R422 Mir7677-201ENSMUST00000184226 67 ntBASIC17.72■□□□□ 0.43
Cd109Q8R422 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC17.72■□□□□ 0.43
Cd109Q8R422 Gm37835-201ENSMUST00000193305 361 ntBASIC17.72■□□□□ 0.43
Cd109Q8R422 Gm4482-201ENSMUST00000200876 742 ntBASIC17.72■□□□□ 0.43
Cd109Q8R422 AC169036.1-201ENSMUST00000227994 296 ntBASIC17.72■□□□□ 0.43
Cd109Q8R422 AC171277.1-201ENSMUST00000216902 1441 ntBASIC17.72■□□□□ 0.43
Cd109Q8R422 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cd109Q8R422 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cd109Q8R422 Gm6198-201ENSMUST00000191337 2929 ntBASIC17.72■□□□□ 0.43
Cd109Q8R422 Gm6580-201ENSMUST00000117504 1357 ntBASIC17.72■□□□□ 0.43
Cd109Q8R422 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cd109Q8R422 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Cd109Q8R422 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Cd109Q8R422 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cd109Q8R422 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cd109Q8R422 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC17.72■□□□□ 0.43
Cd109Q8R422 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cd109Q8R422 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
Cd109Q8R422 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cd109Q8R422 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cd109Q8R422 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cd109Q8R422 Gm12165-201ENSMUST00000117047 342 ntBASIC17.72■□□□□ 0.43
Cd109Q8R422 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cd109Q8R422 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Cd109Q8R422 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cd109Q8R422 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC17.72■□□□□ 0.43
Cd109Q8R422 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cd109Q8R422 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cd109Q8R422 Gm38577-201ENSMUST00000221531 4545 ntBASIC17.72■□□□□ 0.43
Cd109Q8R422 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Cd109Q8R422 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC17.71■□□□□ 0.43
Cd109Q8R422 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Cd109Q8R422 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cd109Q8R422 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC17.71■□□□□ 0.43
Cd109Q8R422 Gm38346-201ENSMUST00000192379 2639 ntBASIC17.71■□□□□ 0.43
Cd109Q8R422 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Cd109Q8R422 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
Cd109Q8R422 Gm44291-201ENSMUST00000203102 2865 ntBASIC17.71■□□□□ 0.43
Cd109Q8R422 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cd109Q8R422 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cd109Q8R422 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cd109Q8R422 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cd109Q8R422 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cd109Q8R422 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cd109Q8R422 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cd109Q8R422 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 88.5 ms