Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Atf7Q8R0S1 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Atf7Q8R0S1 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC14.89□□□□□ -0.03
Atf7Q8R0S1 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC14.89□□□□□ -0.03
Atf7Q8R0S1 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Atf7Q8R0S1 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Atf7Q8R0S1 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Atf7Q8R0S1 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Atf7Q8R0S1 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Atf7Q8R0S1 Dctn4-202ENSMUST00000223590 1530 ntBASIC14.89□□□□□ -0.03
Atf7Q8R0S1 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Atf7Q8R0S1 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Atf7Q8R0S1 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Atf7Q8R0S1 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Atf7Q8R0S1 Gm16379-201ENSMUST00000161469 348 ntBASIC14.89□□□□□ -0.03
Atf7Q8R0S1 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Atf7Q8R0S1 Gm8762-201ENSMUST00000193486 339 ntBASIC14.89□□□□□ -0.03
Atf7Q8R0S1 AC108416.1-202ENSMUST00000228927 1201 ntBASIC14.89□□□□□ -0.03
Atf7Q8R0S1 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Atf7Q8R0S1 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Atf7Q8R0S1 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Atf7Q8R0S1 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC14.89□□□□□ -0.03
Atf7Q8R0S1 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Atf7Q8R0S1 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Atf7Q8R0S1 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Atf7Q8R0S1 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Atf7Q8R0S1 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Atf7Q8R0S1 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Atf7Q8R0S1 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Atf7Q8R0S1 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Atf7Q8R0S1 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Atf7Q8R0S1 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Atf7Q8R0S1 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Atf7Q8R0S1 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Atf7Q8R0S1 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Atf7Q8R0S1 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Atf7Q8R0S1 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Atf7Q8R0S1 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Atf7Q8R0S1 Gm9431-201ENSMUST00000119765 1051 ntBASIC14.88□□□□□ -0.03
Atf7Q8R0S1 Gm8018-201ENSMUST00000173536 789 ntBASIC14.88□□□□□ -0.03
Atf7Q8R0S1 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC14.88□□□□□ -0.03
Atf7Q8R0S1 Gm8565-201ENSMUST00000183259 1014 ntBASIC14.88□□□□□ -0.03
Atf7Q8R0S1 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Atf7Q8R0S1 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Atf7Q8R0S1 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Atf7Q8R0S1 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Atf7Q8R0S1 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Atf7Q8R0S1 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Atf7Q8R0S1 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Atf7Q8R0S1 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Atf7Q8R0S1 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC14.88□□□□□ -0.03
Atf7Q8R0S1 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Atf7Q8R0S1 AC126262.1-201ENSMUST00000221802 1904 ntBASIC14.88□□□□□ -0.03
Atf7Q8R0S1 Gm20554-201ENSMUST00000177421 2352 ntBASIC14.88□□□□□ -0.03
Atf7Q8R0S1 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Atf7Q8R0S1 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Atf7Q8R0S1 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Atf7Q8R0S1 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Atf7Q8R0S1 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC14.87□□□□□ -0.03
Atf7Q8R0S1 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Atf7Q8R0S1 CT009757.3-201ENSMUST00000223367 2320 ntBASIC14.87□□□□□ -0.03
Atf7Q8R0S1 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Atf7Q8R0S1 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Atf7Q8R0S1 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Atf7Q8R0S1 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Atf7Q8R0S1 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Atf7Q8R0S1 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Atf7Q8R0S1 Gm11425-201ENSMUST00000119608 498 ntBASIC14.87□□□□□ -0.03
Atf7Q8R0S1 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Atf7Q8R0S1 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Atf7Q8R0S1 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Atf7Q8R0S1 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Atf7Q8R0S1 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Atf7Q8R0S1 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Atf7Q8R0S1 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC14.87□□□□□ -0.03
Atf7Q8R0S1 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Atf7Q8R0S1 Gm5781-201ENSMUST00000219792 443 ntBASIC14.87□□□□□ -0.03
Atf7Q8R0S1 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC14.87□□□□□ -0.03
Atf7Q8R0S1 Gm9396-201ENSMUST00000076703 567 ntBASIC14.87□□□□□ -0.03
Atf7Q8R0S1 Gm22058-201ENSMUST00000083393 310 ntBASIC14.87□□□□□ -0.03
Atf7Q8R0S1 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Atf7Q8R0S1 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Atf7Q8R0S1 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Atf7Q8R0S1 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC14.87□□□□□ -0.03
Atf7Q8R0S1 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Atf7Q8R0S1 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Atf7Q8R0S1 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Atf7Q8R0S1 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Atf7Q8R0S1 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Atf7Q8R0S1 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Atf7Q8R0S1 AC117194.1-201ENSMUST00000224847 3002 ntBASIC14.87□□□□□ -0.03
Atf7Q8R0S1 Gm37269-201ENSMUST00000193906 1891 ntBASIC14.86□□□□□ -0.03
Atf7Q8R0S1 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC14.86□□□□□ -0.03
Atf7Q8R0S1 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Atf7Q8R0S1 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Atf7Q8R0S1 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC14.86□□□□□ -0.03
Atf7Q8R0S1 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Atf7Q8R0S1 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC14.86□□□□□ -0.03
Atf7Q8R0S1 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Atf7Q8R0S1 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms