Protein–RNA interactions for Protein: Q8K558

Treml1, Trem-like transcript 1 protein, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml1Q8K558 Gm7399-201ENSMUST00000032395 858 ntBASIC12.44□□□□□ -0.42
Treml1Q8K558 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Treml1Q8K558 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Treml1Q8K558 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Treml1Q8K558 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Treml1Q8K558 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Treml1Q8K558 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Treml1Q8K558 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Treml1Q8K558 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Treml1Q8K558 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Treml1Q8K558 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Treml1Q8K558 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.44□□□□□ -0.42
Treml1Q8K558 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Treml1Q8K558 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Treml1Q8K558 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Treml1Q8K558 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
Treml1Q8K558 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Treml1Q8K558 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Treml1Q8K558 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Treml1Q8K558 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Treml1Q8K558 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Treml1Q8K558 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Treml1Q8K558 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Treml1Q8K558 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Treml1Q8K558 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Treml1Q8K558 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.43□□□□□ -0.42
Treml1Q8K558 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Treml1Q8K558 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Treml1Q8K558 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Treml1Q8K558 Gm27501-201ENSMUST00000183599 107 ntBASIC12.43□□□□□ -0.42
Treml1Q8K558 Mir8109-201ENSMUST00000184375 117 ntBASIC12.43□□□□□ -0.42
Treml1Q8K558 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.43□□□□□ -0.42
Treml1Q8K558 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.43□□□□□ -0.42
Treml1Q8K558 Gm9899-201ENSMUST00000065519 555 ntBASIC12.43□□□□□ -0.42
Treml1Q8K558 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Treml1Q8K558 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Treml1Q8K558 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Treml1Q8K558 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Treml1Q8K558 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Treml1Q8K558 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Treml1Q8K558 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.43□□□□□ -0.42
Treml1Q8K558 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Treml1Q8K558 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.43□□□□□ -0.42
Treml1Q8K558 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.43□□□□□ -0.42
Treml1Q8K558 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Treml1Q8K558 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Treml1Q8K558 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Treml1Q8K558 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Treml1Q8K558 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Treml1Q8K558 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Treml1Q8K558 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Treml1Q8K558 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Treml1Q8K558 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Treml1Q8K558 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Treml1Q8K558 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Treml1Q8K558 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.42□□□□□ -0.42
Treml1Q8K558 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Treml1Q8K558 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Treml1Q8K558 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.42□□□□□ -0.42
Treml1Q8K558 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Treml1Q8K558 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Treml1Q8K558 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Treml1Q8K558 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Treml1Q8K558 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Treml1Q8K558 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.42□□□□□ -0.42
Treml1Q8K558 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.42□□□□□ -0.42
Treml1Q8K558 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.42□□□□□ -0.42
Treml1Q8K558 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Treml1Q8K558 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.42□□□□□ -0.42
Treml1Q8K558 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Treml1Q8K558 Gm6334-201ENSMUST00000207083 228 ntBASIC12.42□□□□□ -0.42
Treml1Q8K558 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.42□□□□□ -0.42
Treml1Q8K558 Gm5904-201ENSMUST00000210286 865 ntBASIC12.42□□□□□ -0.42
Treml1Q8K558 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.42□□□□□ -0.42
Treml1Q8K558 Gm5781-201ENSMUST00000219792 443 ntBASIC12.42□□□□□ -0.42
Treml1Q8K558 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Treml1Q8K558 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Treml1Q8K558 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Treml1Q8K558 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Treml1Q8K558 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Treml1Q8K558 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Treml1Q8K558 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Treml1Q8K558 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Treml1Q8K558 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Treml1Q8K558 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Treml1Q8K558 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Treml1Q8K558 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.42□□□□□ -0.42
Treml1Q8K558 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.42□□□□□ -0.42
Treml1Q8K558 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Treml1Q8K558 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Treml1Q8K558 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Treml1Q8K558 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Treml1Q8K558 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Treml1Q8K558 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Treml1Q8K558 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Treml1Q8K558 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Treml1Q8K558 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Treml1Q8K558 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Treml1Q8K558 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Treml1Q8K558 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms