Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC15.47■□□□□ 0.07
Sf3a1Q8K4Z5 Gm5904-201ENSMUST00000210286 865 ntBASIC15.47■□□□□ 0.07
Sf3a1Q8K4Z5 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC15.47■□□□□ 0.07
Sf3a1Q8K4Z5 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC15.47■□□□□ 0.07
Sf3a1Q8K4Z5 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sf3a1Q8K4Z5 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sf3a1Q8K4Z5 AC117194.1-201ENSMUST00000224847 3002 ntBASIC15.47■□□□□ 0.07
Sf3a1Q8K4Z5 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sf3a1Q8K4Z5 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sf3a1Q8K4Z5 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Sf3a1Q8K4Z5 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC15.47■□□□□ 0.07
Sf3a1Q8K4Z5 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Sf3a1Q8K4Z5 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Sf3a1Q8K4Z5 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Sf3a1Q8K4Z5 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sf3a1Q8K4Z5 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Sf3a1Q8K4Z5 Gm6203-201ENSMUST00000209575 1342 ntBASIC15.46■□□□□ 0.07
Sf3a1Q8K4Z5 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sf3a1Q8K4Z5 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Sf3a1Q8K4Z5 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sf3a1Q8K4Z5 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Sf3a1Q8K4Z5 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC15.46■□□□□ 0.07
Sf3a1Q8K4Z5 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC15.46■□□□□ 0.07
Sf3a1Q8K4Z5 Gm27194-201ENSMUST00000175753 2936 ntBASIC15.46■□□□□ 0.07
Sf3a1Q8K4Z5 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sf3a1Q8K4Z5 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Sf3a1Q8K4Z5 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Sf3a1Q8K4Z5 Gm15703-201ENSMUST00000120250 880 ntBASIC15.46■□□□□ 0.07
Sf3a1Q8K4Z5 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Sf3a1Q8K4Z5 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Sf3a1Q8K4Z5 Gm42627-201ENSMUST00000197347 224 ntBASIC15.46■□□□□ 0.07
Sf3a1Q8K4Z5 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC15.46■□□□□ 0.07
Sf3a1Q8K4Z5 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
Sf3a1Q8K4Z5 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sf3a1Q8K4Z5 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sf3a1Q8K4Z5 Gm22058-201ENSMUST00000083393 310 ntBASIC15.46■□□□□ 0.07
Sf3a1Q8K4Z5 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sf3a1Q8K4Z5 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sf3a1Q8K4Z5 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Sf3a1Q8K4Z5 Gm43858-201ENSMUST00000199418 1778 ntBASIC15.46■□□□□ 0.07
Sf3a1Q8K4Z5 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
Sf3a1Q8K4Z5 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Sf3a1Q8K4Z5 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Sf3a1Q8K4Z5 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Sf3a1Q8K4Z5 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Sf3a1Q8K4Z5 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Sf3a1Q8K4Z5 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
Sf3a1Q8K4Z5 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sf3a1Q8K4Z5 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sf3a1Q8K4Z5 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Sf3a1Q8K4Z5 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sf3a1Q8K4Z5 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Sf3a1Q8K4Z5 Gm7789-202ENSMUST00000211273 1400 ntBASIC15.45■□□□□ 0.06
Sf3a1Q8K4Z5 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sf3a1Q8K4Z5 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sf3a1Q8K4Z5 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Sf3a1Q8K4Z5 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sf3a1Q8K4Z5 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sf3a1Q8K4Z5 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sf3a1Q8K4Z5 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sf3a1Q8K4Z5 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Sf3a1Q8K4Z5 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sf3a1Q8K4Z5 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sf3a1Q8K4Z5 Mir1247-201ENSMUST00000116706 82 ntBASIC15.45■□□□□ 0.06
Sf3a1Q8K4Z5 Gm11964-201ENSMUST00000120982 444 ntBASIC15.45■□□□□ 0.06
Sf3a1Q8K4Z5 Gm5863-201ENSMUST00000121760 1008 ntBASIC15.45■□□□□ 0.06
Sf3a1Q8K4Z5 Gm13316-201ENSMUST00000140537 691 ntBASIC15.45■□□□□ 0.06
Sf3a1Q8K4Z5 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC15.45■□□□□ 0.06
Sf3a1Q8K4Z5 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC15.45■□□□□ 0.06
Sf3a1Q8K4Z5 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC15.45■□□□□ 0.06
Sf3a1Q8K4Z5 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Sf3a1Q8K4Z5 Gm6013-201ENSMUST00000212264 699 ntBASIC15.45■□□□□ 0.06
Sf3a1Q8K4Z5 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC15.45■□□□□ 0.06
Sf3a1Q8K4Z5 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sf3a1Q8K4Z5 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Sf3a1Q8K4Z5 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sf3a1Q8K4Z5 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Sf3a1Q8K4Z5 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sf3a1Q8K4Z5 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Sf3a1Q8K4Z5 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Sf3a1Q8K4Z5 AC116503.1-201ENSMUST00000215445 2192 ntBASIC15.45■□□□□ 0.06
Sf3a1Q8K4Z5 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Sf3a1Q8K4Z5 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sf3a1Q8K4Z5 Gm43677-201ENSMUST00000198098 2378 ntBASIC15.44■□□□□ 0.06
Sf3a1Q8K4Z5 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Sf3a1Q8K4Z5 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sf3a1Q8K4Z5 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sf3a1Q8K4Z5 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sf3a1Q8K4Z5 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sf3a1Q8K4Z5 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Sf3a1Q8K4Z5 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sf3a1Q8K4Z5 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC15.44■□□□□ 0.06
Sf3a1Q8K4Z5 AC108416.1-202ENSMUST00000228927 1201 ntBASIC15.44■□□□□ 0.06
Sf3a1Q8K4Z5 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sf3a1Q8K4Z5 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Sf3a1Q8K4Z5 Gm8399-201ENSMUST00000082300 1117 ntBASIC15.44■□□□□ 0.06
Sf3a1Q8K4Z5 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Sf3a1Q8K4Z5 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sf3a1Q8K4Z5 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Sf3a1Q8K4Z5 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms