Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Clrn1Q8K445 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.92□□□□□ -0.5
Clrn1Q8K445 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.92□□□□□ -0.5
Clrn1Q8K445 Gm8793-201ENSMUST00000183069 1303 ntBASIC11.92□□□□□ -0.5
Clrn1Q8K445 Gm43579-201ENSMUST00000202387 1307 ntBASIC11.92□□□□□ -0.5
Clrn1Q8K445 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Clrn1Q8K445 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Clrn1Q8K445 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Clrn1Q8K445 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Clrn1Q8K445 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Clrn1Q8K445 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Clrn1Q8K445 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Clrn1Q8K445 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Clrn1Q8K445 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Clrn1Q8K445 Gm14127-201ENSMUST00000117906 678 ntBASIC11.92□□□□□ -0.5
Clrn1Q8K445 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC11.92□□□□□ -0.5
Clrn1Q8K445 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC11.92□□□□□ -0.5
Clrn1Q8K445 Gm18062-201ENSMUST00000208020 547 ntBASIC11.92□□□□□ -0.5
Clrn1Q8K445 Gm18055-201ENSMUST00000208254 547 ntBASIC11.92□□□□□ -0.5
Clrn1Q8K445 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC11.92□□□□□ -0.5
Clrn1Q8K445 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.92□□□□□ -0.5
Clrn1Q8K445 AC140451.2-201ENSMUST00000228030 664 ntBASIC11.92□□□□□ -0.5
Clrn1Q8K445 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Clrn1Q8K445 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Clrn1Q8K445 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Clrn1Q8K445 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Clrn1Q8K445 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Clrn1Q8K445 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Clrn1Q8K445 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Clrn1Q8K445 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.92□□□□□ -0.5
Clrn1Q8K445 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Clrn1Q8K445 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Clrn1Q8K445 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Clrn1Q8K445 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Clrn1Q8K445 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Clrn1Q8K445 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.92□□□□□ -0.5
Clrn1Q8K445 Ntrk2-204ENSMUST00000224259 3049 ntBASIC11.92□□□□□ -0.5
Clrn1Q8K445 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Clrn1Q8K445 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Clrn1Q8K445 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Clrn1Q8K445 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Clrn1Q8K445 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Clrn1Q8K445 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Clrn1Q8K445 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Clrn1Q8K445 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Clrn1Q8K445 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Clrn1Q8K445 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.91□□□□□ -0.5
Clrn1Q8K445 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Clrn1Q8K445 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Clrn1Q8K445 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Clrn1Q8K445 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
Clrn1Q8K445 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.91□□□□□ -0.5
Clrn1Q8K445 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Clrn1Q8K445 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Clrn1Q8K445 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Clrn1Q8K445 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Clrn1Q8K445 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC11.91□□□□□ -0.5
Clrn1Q8K445 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Clrn1Q8K445 Gm12502-201ENSMUST00000120197 444 ntBASIC11.91□□□□□ -0.5
Clrn1Q8K445 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Clrn1Q8K445 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Clrn1Q8K445 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Clrn1Q8K445 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Clrn1Q8K445 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC11.91□□□□□ -0.5
Clrn1Q8K445 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.91□□□□□ -0.5
Clrn1Q8K445 Gm5186-201ENSMUST00000218781 920 ntBASIC11.91□□□□□ -0.5
Clrn1Q8K445 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Clrn1Q8K445 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Clrn1Q8K445 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Clrn1Q8K445 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Clrn1Q8K445 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Clrn1Q8K445 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Clrn1Q8K445 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Clrn1Q8K445 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Clrn1Q8K445 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Clrn1Q8K445 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Clrn1Q8K445 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Clrn1Q8K445 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Clrn1Q8K445 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.91□□□□□ -0.5
Clrn1Q8K445 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
Clrn1Q8K445 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Clrn1Q8K445 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Clrn1Q8K445 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Clrn1Q8K445 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Clrn1Q8K445 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.91□□□□□ -0.5
Clrn1Q8K445 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Clrn1Q8K445 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.9□□□□□ -0.5
Clrn1Q8K445 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Clrn1Q8K445 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.9□□□□□ -0.5
Clrn1Q8K445 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC11.9□□□□□ -0.5
Clrn1Q8K445 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Clrn1Q8K445 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Clrn1Q8K445 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.9□□□□□ -0.5
Clrn1Q8K445 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Clrn1Q8K445 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Clrn1Q8K445 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Clrn1Q8K445 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Clrn1Q8K445 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Clrn1Q8K445 Gm11591-201ENSMUST00000120063 702 ntBASIC11.9□□□□□ -0.5
Clrn1Q8K445 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 128.8 ms