Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cchcr1Q8K2I2 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cchcr1Q8K2I2 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC14.95□□□□□ -0.02
Cchcr1Q8K2I2 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC14.95□□□□□ -0.02
Cchcr1Q8K2I2 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cchcr1Q8K2I2 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cchcr1Q8K2I2 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Cchcr1Q8K2I2 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC14.94□□□□□ -0.02
Cchcr1Q8K2I2 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC14.94□□□□□ -0.02
Cchcr1Q8K2I2 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Cchcr1Q8K2I2 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cchcr1Q8K2I2 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cchcr1Q8K2I2 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Cchcr1Q8K2I2 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cchcr1Q8K2I2 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC14.94□□□□□ -0.02
Cchcr1Q8K2I2 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cchcr1Q8K2I2 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC14.94□□□□□ -0.02
Cchcr1Q8K2I2 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cchcr1Q8K2I2 Gm24644-201ENSMUST00000157114 139 ntBASIC14.94□□□□□ -0.02
Cchcr1Q8K2I2 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC14.94□□□□□ -0.02
Cchcr1Q8K2I2 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC14.94□□□□□ -0.02
Cchcr1Q8K2I2 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cchcr1Q8K2I2 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC14.94□□□□□ -0.02
Cchcr1Q8K2I2 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Cchcr1Q8K2I2 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC14.94□□□□□ -0.02
Cchcr1Q8K2I2 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
Cchcr1Q8K2I2 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC14.94□□□□□ -0.02
Cchcr1Q8K2I2 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC14.94□□□□□ -0.02
Cchcr1Q8K2I2 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cchcr1Q8K2I2 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cchcr1Q8K2I2 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cchcr1Q8K2I2 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
Cchcr1Q8K2I2 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cchcr1Q8K2I2 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cchcr1Q8K2I2 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cchcr1Q8K2I2 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cchcr1Q8K2I2 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cchcr1Q8K2I2 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cchcr1Q8K2I2 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Cchcr1Q8K2I2 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC14.94□□□□□ -0.02
Cchcr1Q8K2I2 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cchcr1Q8K2I2 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cchcr1Q8K2I2 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cchcr1Q8K2I2 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cchcr1Q8K2I2 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cchcr1Q8K2I2 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cchcr1Q8K2I2 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cchcr1Q8K2I2 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cchcr1Q8K2I2 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cchcr1Q8K2I2 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC14.93□□□□□ -0.02
Cchcr1Q8K2I2 Gm12384-201ENSMUST00000119228 919 ntBASIC14.93□□□□□ -0.02
Cchcr1Q8K2I2 Gm5863-201ENSMUST00000121760 1008 ntBASIC14.93□□□□□ -0.02
Cchcr1Q8K2I2 Gm12138-201ENSMUST00000122180 951 ntBASIC14.93□□□□□ -0.02
Cchcr1Q8K2I2 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC14.93□□□□□ -0.02
Cchcr1Q8K2I2 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC14.93□□□□□ -0.02
Cchcr1Q8K2I2 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC14.93□□□□□ -0.02
Cchcr1Q8K2I2 Gm9794-201ENSMUST00000202370 423 ntBASIC14.93□□□□□ -0.02
Cchcr1Q8K2I2 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cchcr1Q8K2I2 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cchcr1Q8K2I2 Gm24526-201ENSMUST00000082921 158 ntBASIC14.93□□□□□ -0.02
Cchcr1Q8K2I2 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Cchcr1Q8K2I2 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cchcr1Q8K2I2 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cchcr1Q8K2I2 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cchcr1Q8K2I2 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cchcr1Q8K2I2 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC14.93□□□□□ -0.02
Cchcr1Q8K2I2 AC164702.1-201ENSMUST00000220135 2212 ntBASIC14.93□□□□□ -0.02
Cchcr1Q8K2I2 Rubie-203ENSMUST00000227803 2430 ntBASIC14.93□□□□□ -0.02
Cchcr1Q8K2I2 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC14.93□□□□□ -0.02
Cchcr1Q8K2I2 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
Cchcr1Q8K2I2 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cchcr1Q8K2I2 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cchcr1Q8K2I2 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cchcr1Q8K2I2 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cchcr1Q8K2I2 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cchcr1Q8K2I2 Gm18263-201ENSMUST00000220846 1928 ntBASIC14.92□□□□□ -0.02
Cchcr1Q8K2I2 Matn2-203ENSMUST00000226766 3252 ntBASIC14.92□□□□□ -0.02
Cchcr1Q8K2I2 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cchcr1Q8K2I2 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cchcr1Q8K2I2 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cchcr1Q8K2I2 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC14.92□□□□□ -0.02
Cchcr1Q8K2I2 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC14.92□□□□□ -0.02
Cchcr1Q8K2I2 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC14.92□□□□□ -0.02
Cchcr1Q8K2I2 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC14.92□□□□□ -0.02
Cchcr1Q8K2I2 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Cchcr1Q8K2I2 Gm27847-201ENSMUST00000183711 107 ntBASIC14.92□□□□□ -0.02
Cchcr1Q8K2I2 Gm27375-201ENSMUST00000183799 107 ntBASIC14.92□□□□□ -0.02
Cchcr1Q8K2I2 Gm32025-201ENSMUST00000217960 307 ntBASIC14.92□□□□□ -0.02
Cchcr1Q8K2I2 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cchcr1Q8K2I2 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cchcr1Q8K2I2 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cchcr1Q8K2I2 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cchcr1Q8K2I2 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cchcr1Q8K2I2 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cchcr1Q8K2I2 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cchcr1Q8K2I2 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cchcr1Q8K2I2 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cchcr1Q8K2I2 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cchcr1Q8K2I2 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC14.92□□□□□ -0.02
Cchcr1Q8K2I2 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms