Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Syne4Q8CII8 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC14.24□□□□□ -0.13
Syne4Q8CII8 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Syne4Q8CII8 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Syne4Q8CII8 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Syne4Q8CII8 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Syne4Q8CII8 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Syne4Q8CII8 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Syne4Q8CII8 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Syne4Q8CII8 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Syne4Q8CII8 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Syne4Q8CII8 H2-Q3-201ENSMUST00000172583 608 ntBASIC14.24□□□□□ -0.13
Syne4Q8CII8 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Syne4Q8CII8 Mir6546-201ENSMUST00000184460 62 ntBASIC14.24□□□□□ -0.13
Syne4Q8CII8 Gm5733-201ENSMUST00000190232 939 ntBASIC14.24□□□□□ -0.13
Syne4Q8CII8 Gm4482-201ENSMUST00000200876 742 ntBASIC14.24□□□□□ -0.13
Syne4Q8CII8 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Syne4Q8CII8 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Syne4Q8CII8 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.24□□□□□ -0.13
Syne4Q8CII8 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Syne4Q8CII8 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Syne4Q8CII8 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Syne4Q8CII8 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Syne4Q8CII8 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Syne4Q8CII8 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.24□□□□□ -0.13
Syne4Q8CII8 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Syne4Q8CII8 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Syne4Q8CII8 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Syne4Q8CII8 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Syne4Q8CII8 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Syne4Q8CII8 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Syne4Q8CII8 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Syne4Q8CII8 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Syne4Q8CII8 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Syne4Q8CII8 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Syne4Q8CII8 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Syne4Q8CII8 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.23□□□□□ -0.13
Syne4Q8CII8 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Syne4Q8CII8 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Syne4Q8CII8 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Syne4Q8CII8 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Syne4Q8CII8 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC14.23□□□□□ -0.13
Syne4Q8CII8 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Syne4Q8CII8 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Syne4Q8CII8 Gm23596-201ENSMUST00000104304 132 ntBASIC14.23□□□□□ -0.13
Syne4Q8CII8 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Syne4Q8CII8 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC14.23□□□□□ -0.13
Syne4Q8CII8 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Syne4Q8CII8 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC14.23□□□□□ -0.13
Syne4Q8CII8 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC14.23□□□□□ -0.13
Syne4Q8CII8 Gm8365-201ENSMUST00000197334 648 ntBASIC14.23□□□□□ -0.13
Syne4Q8CII8 Gm42682-201ENSMUST00000198349 1265 ntBASIC14.23□□□□□ -0.13
Syne4Q8CII8 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC14.23□□□□□ -0.13
Syne4Q8CII8 Ginm1-202ENSMUST00000065124 300 ntBASIC14.23□□□□□ -0.13
Syne4Q8CII8 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Syne4Q8CII8 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.23□□□□□ -0.13
Syne4Q8CII8 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Syne4Q8CII8 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC14.23□□□□□ -0.13
Syne4Q8CII8 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Syne4Q8CII8 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Syne4Q8CII8 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Syne4Q8CII8 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Syne4Q8CII8 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC14.23□□□□□ -0.13
Syne4Q8CII8 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Syne4Q8CII8 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Syne4Q8CII8 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC14.22□□□□□ -0.13
Syne4Q8CII8 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Syne4Q8CII8 Gm38355-201ENSMUST00000192514 1570 ntBASIC14.22□□□□□ -0.13
Syne4Q8CII8 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Syne4Q8CII8 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Syne4Q8CII8 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Syne4Q8CII8 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Syne4Q8CII8 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Syne4Q8CII8 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Syne4Q8CII8 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Syne4Q8CII8 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Syne4Q8CII8 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Syne4Q8CII8 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Syne4Q8CII8 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Syne4Q8CII8 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Syne4Q8CII8 Gm16397-201ENSMUST00000122201 494 ntBASIC14.22□□□□□ -0.13
Syne4Q8CII8 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC14.22□□□□□ -0.13
Syne4Q8CII8 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC14.22□□□□□ -0.13
Syne4Q8CII8 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC14.22□□□□□ -0.13
Syne4Q8CII8 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Syne4Q8CII8 Gm9022-201ENSMUST00000182482 992 ntBASIC14.22□□□□□ -0.13
Syne4Q8CII8 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Syne4Q8CII8 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC14.22□□□□□ -0.13
Syne4Q8CII8 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC14.22□□□□□ -0.13
Syne4Q8CII8 Gm7600-201ENSMUST00000209657 785 ntBASIC14.22□□□□□ -0.13
Syne4Q8CII8 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC14.22□□□□□ -0.13
Syne4Q8CII8 CT009713.8-202ENSMUST00000224732 385 ntBASIC14.22□□□□□ -0.13
Syne4Q8CII8 CT030637.1-201ENSMUST00000228016 669 ntBASIC14.22□□□□□ -0.13
Syne4Q8CII8 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Syne4Q8CII8 Mir219a-1-201ENSMUST00000083621 110 ntBASIC14.22□□□□□ -0.13
Syne4Q8CII8 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Syne4Q8CII8 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Syne4Q8CII8 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Syne4Q8CII8 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC14.22□□□□□ -0.13
Syne4Q8CII8 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms