Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Rab11fip3Q8CHD8 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rab11fip3Q8CHD8 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rab11fip3Q8CHD8 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC16.33■□□□□ 0.21
Rab11fip3Q8CHD8 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rab11fip3Q8CHD8 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Rab11fip3Q8CHD8 Gm14644-201ENSMUST00000116671 647 ntBASIC16.33■□□□□ 0.2
Rab11fip3Q8CHD8 Gm2260-201ENSMUST00000184965 657 ntBASIC16.33■□□□□ 0.2
Rab11fip3Q8CHD8 Gm32999-201ENSMUST00000192693 562 ntBASIC16.33■□□□□ 0.2
Rab11fip3Q8CHD8 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC16.33■□□□□ 0.2
Rab11fip3Q8CHD8 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC16.33■□□□□ 0.2
Rab11fip3Q8CHD8 Gm19187-201ENSMUST00000206781 892 ntBASIC16.33■□□□□ 0.2
Rab11fip3Q8CHD8 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rab11fip3Q8CHD8 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rab11fip3Q8CHD8 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rab11fip3Q8CHD8 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rab11fip3Q8CHD8 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rab11fip3Q8CHD8 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Rab11fip3Q8CHD8 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rab11fip3Q8CHD8 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rab11fip3Q8CHD8 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rab11fip3Q8CHD8 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rab11fip3Q8CHD8 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
Rab11fip3Q8CHD8 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rab11fip3Q8CHD8 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rab11fip3Q8CHD8 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Rab11fip3Q8CHD8 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rab11fip3Q8CHD8 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Rab11fip3Q8CHD8 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rab11fip3Q8CHD8 Gm13996-201ENSMUST00000118456 430 ntBASIC16.32■□□□□ 0.2
Rab11fip3Q8CHD8 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Rab11fip3Q8CHD8 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rab11fip3Q8CHD8 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rab11fip3Q8CHD8 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Rab11fip3Q8CHD8 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rab11fip3Q8CHD8 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Rab11fip3Q8CHD8 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rab11fip3Q8CHD8 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Rab11fip3Q8CHD8 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC16.32■□□□□ 0.2
Rab11fip3Q8CHD8 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rab11fip3Q8CHD8 Gm42840-201ENSMUST00000200303 2251 ntBASIC16.32■□□□□ 0.2
Rab11fip3Q8CHD8 Gm45495-201ENSMUST00000200940 1700 ntBASIC16.32■□□□□ 0.2
Rab11fip3Q8CHD8 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rab11fip3Q8CHD8 Gm44958-201ENSMUST00000203734 736 ntBASIC16.32■□□□□ 0.2
Rab11fip3Q8CHD8 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rab11fip3Q8CHD8 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rab11fip3Q8CHD8 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rab11fip3Q8CHD8 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rab11fip3Q8CHD8 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rab11fip3Q8CHD8 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rab11fip3Q8CHD8 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rab11fip3Q8CHD8 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Rab11fip3Q8CHD8 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rab11fip3Q8CHD8 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rab11fip3Q8CHD8 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rab11fip3Q8CHD8 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rab11fip3Q8CHD8 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rab11fip3Q8CHD8 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Rab11fip3Q8CHD8 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rab11fip3Q8CHD8 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rab11fip3Q8CHD8 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rab11fip3Q8CHD8 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rab11fip3Q8CHD8 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC16.31■□□□□ 0.2
Rab11fip3Q8CHD8 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rab11fip3Q8CHD8 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rab11fip3Q8CHD8 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Rab11fip3Q8CHD8 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rab11fip3Q8CHD8 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC16.31■□□□□ 0.2
Rab11fip3Q8CHD8 Gm25700-201ENSMUST00000177693 110 ntBASIC16.31■□□□□ 0.2
Rab11fip3Q8CHD8 Gm9022-201ENSMUST00000182482 992 ntBASIC16.31■□□□□ 0.2
Rab11fip3Q8CHD8 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rab11fip3Q8CHD8 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC16.31■□□□□ 0.2
Rab11fip3Q8CHD8 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC16.31■□□□□ 0.2
Rab11fip3Q8CHD8 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC16.31■□□□□ 0.2
Rab11fip3Q8CHD8 Gzmn-202ENSMUST00000225535 989 ntBASIC16.31■□□□□ 0.2
Rab11fip3Q8CHD8 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC16.31■□□□□ 0.2
Rab11fip3Q8CHD8 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rab11fip3Q8CHD8 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rab11fip3Q8CHD8 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
Rab11fip3Q8CHD8 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rab11fip3Q8CHD8 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rab11fip3Q8CHD8 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rab11fip3Q8CHD8 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rab11fip3Q8CHD8 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rab11fip3Q8CHD8 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rab11fip3Q8CHD8 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rab11fip3Q8CHD8 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rab11fip3Q8CHD8 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rab11fip3Q8CHD8 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rab11fip3Q8CHD8 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rab11fip3Q8CHD8 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rab11fip3Q8CHD8 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC16.3■□□□□ 0.2
Rab11fip3Q8CHD8 Gm11439-201ENSMUST00000118598 409 ntBASIC16.3■□□□□ 0.2
Rab11fip3Q8CHD8 Gm24990-201ENSMUST00000157406 323 ntBASIC16.3■□□□□ 0.2
Rab11fip3Q8CHD8 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rab11fip3Q8CHD8 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rab11fip3Q8CHD8 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rab11fip3Q8CHD8 Gm9230-201ENSMUST00000188228 532 ntBASIC16.3■□□□□ 0.2
Rab11fip3Q8CHD8 Gm42937-201ENSMUST00000197360 752 ntBASIC16.3■□□□□ 0.2
Rab11fip3Q8CHD8 Gm7619-201ENSMUST00000210649 1282 ntBASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms