Protein–RNA interactions for Protein: Q8CE13

Ccdc17, Coiled-coil domain-containing protein 17, mousemouse

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc17Q8CE13 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc17Q8CE13 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Ccdc17Q8CE13 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc17Q8CE13 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc17Q8CE13 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc17Q8CE13 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc17Q8CE13 Gm44775-201ENSMUST00000207266 1456 ntBASIC13.16□□□□□ -0.3
Ccdc17Q8CE13 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc17Q8CE13 Gm4366-201ENSMUST00000201488 1342 ntBASIC13.16□□□□□ -0.3
Ccdc17Q8CE13 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc17Q8CE13 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc17Q8CE13 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.16□□□□□ -0.3
Ccdc17Q8CE13 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc17Q8CE13 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc17Q8CE13 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc17Q8CE13 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc17Q8CE13 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC13.16□□□□□ -0.3
Ccdc17Q8CE13 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc17Q8CE13 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc17Q8CE13 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc17Q8CE13 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc17Q8CE13 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.16□□□□□ -0.3
Ccdc17Q8CE13 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc17Q8CE13 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Ccdc17Q8CE13 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Ccdc17Q8CE13 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc17Q8CE13 Gm14704-201ENSMUST00000120300 874 ntBASIC13.16□□□□□ -0.3
Ccdc17Q8CE13 Gm13461-201ENSMUST00000120980 662 ntBASIC13.16□□□□□ -0.3
Ccdc17Q8CE13 Gm15547-201ENSMUST00000122152 333 ntBASIC13.16□□□□□ -0.3
Ccdc17Q8CE13 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc17Q8CE13 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC13.16□□□□□ -0.3
Ccdc17Q8CE13 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc17Q8CE13 Gm22334-201ENSMUST00000158070 133 ntBASIC13.16□□□□□ -0.3
Ccdc17Q8CE13 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC13.16□□□□□ -0.3
Ccdc17Q8CE13 Gm37986-201ENSMUST00000193285 383 ntBASIC13.16□□□□□ -0.3
Ccdc17Q8CE13 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC13.16□□□□□ -0.3
Ccdc17Q8CE13 AC135669.1-202ENSMUST00000216742 540 ntBASIC13.16□□□□□ -0.3
Ccdc17Q8CE13 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc17Q8CE13 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.16□□□□□ -0.3
Ccdc17Q8CE13 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc17Q8CE13 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc17Q8CE13 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc17Q8CE13 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc17Q8CE13 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc17Q8CE13 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc17Q8CE13 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Ccdc17Q8CE13 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc17Q8CE13 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc17Q8CE13 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc17Q8CE13 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.16□□□□□ -0.3
Ccdc17Q8CE13 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc17Q8CE13 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc17Q8CE13 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc17Q8CE13 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc17Q8CE13 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc17Q8CE13 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc17Q8CE13 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Ccdc17Q8CE13 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc17Q8CE13 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Ccdc17Q8CE13 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc17Q8CE13 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc17Q8CE13 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc17Q8CE13 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc17Q8CE13 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc17Q8CE13 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Ccdc17Q8CE13 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc17Q8CE13 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc17Q8CE13 Snord83b-201ENSMUST00000104546 94 ntBASIC13.15□□□□□ -0.3
Ccdc17Q8CE13 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc17Q8CE13 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc17Q8CE13 Gm11930-201ENSMUST00000117788 190 ntBASIC13.15□□□□□ -0.3
Ccdc17Q8CE13 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC13.15□□□□□ -0.3
Ccdc17Q8CE13 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.15□□□□□ -0.3
Ccdc17Q8CE13 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Ccdc17Q8CE13 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.15□□□□□ -0.3
Ccdc17Q8CE13 Gm6153-201ENSMUST00000172004 1058 ntBASIC13.15□□□□□ -0.3
Ccdc17Q8CE13 Gm25700-201ENSMUST00000177693 110 ntBASIC13.15□□□□□ -0.3
Ccdc17Q8CE13 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Ccdc17Q8CE13 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Ccdc17Q8CE13 Gm5641-202ENSMUST00000198699 1080 ntBASIC13.15□□□□□ -0.3
Ccdc17Q8CE13 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.15□□□□□ -0.3
Ccdc17Q8CE13 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc17Q8CE13 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc17Q8CE13 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC13.15□□□□□ -0.3
Ccdc17Q8CE13 Gm22058-201ENSMUST00000083393 310 ntBASIC13.15□□□□□ -0.3
Ccdc17Q8CE13 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc17Q8CE13 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc17Q8CE13 Gm8228-201ENSMUST00000189949 2192 ntBASIC13.15□□□□□ -0.3
Ccdc17Q8CE13 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc17Q8CE13 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC13.15□□□□□ -0.3
Ccdc17Q8CE13 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Ccdc17Q8CE13 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Ccdc17Q8CE13 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc17Q8CE13 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc17Q8CE13 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc17Q8CE13 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc17Q8CE13 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc17Q8CE13 CU062626.3-201ENSMUST00000225522 1411 ntBASIC13.14□□□□□ -0.31
Ccdc17Q8CE13 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc17Q8CE13 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms