Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc87Q8CDL9 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
Ccdc87Q8CDL9 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
Ccdc87Q8CDL9 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc87Q8CDL9 Gm43858-201ENSMUST00000199418 1778 ntBASIC13.42□□□□□ -0.26
Ccdc87Q8CDL9 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc87Q8CDL9 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Ccdc87Q8CDL9 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc87Q8CDL9 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Ccdc87Q8CDL9 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC13.42□□□□□ -0.26
Ccdc87Q8CDL9 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc87Q8CDL9 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc87Q8CDL9 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC13.41□□□□□ -0.26
Ccdc87Q8CDL9 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc87Q8CDL9 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc87Q8CDL9 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc87Q8CDL9 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC13.41□□□□□ -0.26
Ccdc87Q8CDL9 Gm7224-201ENSMUST00000121359 2066 ntBASIC13.41□□□□□ -0.26
Ccdc87Q8CDL9 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Ccdc87Q8CDL9 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC13.41□□□□□ -0.26
Ccdc87Q8CDL9 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Ccdc87Q8CDL9 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.41□□□□□ -0.26
Ccdc87Q8CDL9 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC13.41□□□□□ -0.26
Ccdc87Q8CDL9 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Ccdc87Q8CDL9 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc87Q8CDL9 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc87Q8CDL9 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Ccdc87Q8CDL9 Gm15824-201ENSMUST00000119516 955 ntBASIC13.41□□□□□ -0.26
Ccdc87Q8CDL9 Gm2420-201ENSMUST00000119864 2149 ntBASIC13.41□□□□□ -0.26
Ccdc87Q8CDL9 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC13.41□□□□□ -0.26
Ccdc87Q8CDL9 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc87Q8CDL9 Ighv8-10-201ENSMUST00000199579 358 ntBASIC13.41□□□□□ -0.26
Ccdc87Q8CDL9 Gm7067-201ENSMUST00000207698 1249 ntBASIC13.41□□□□□ -0.26
Ccdc87Q8CDL9 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC13.41□□□□□ -0.26
Ccdc87Q8CDL9 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC13.41□□□□□ -0.26
Ccdc87Q8CDL9 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13.41□□□□□ -0.26
Ccdc87Q8CDL9 AC110817.1-201ENSMUST00000225706 605 ntBASIC13.41□□□□□ -0.26
Ccdc87Q8CDL9 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc87Q8CDL9 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc87Q8CDL9 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc87Q8CDL9 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc87Q8CDL9 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc87Q8CDL9 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc87Q8CDL9 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Ccdc87Q8CDL9 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc87Q8CDL9 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc87Q8CDL9 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc87Q8CDL9 AC101945.2-201ENSMUST00000227886 1377 ntBASIC13.41□□□□□ -0.26
Ccdc87Q8CDL9 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc87Q8CDL9 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc87Q8CDL9 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc87Q8CDL9 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc87Q8CDL9 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc87Q8CDL9 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc87Q8CDL9 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc87Q8CDL9 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc87Q8CDL9 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Ccdc87Q8CDL9 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc87Q8CDL9 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc87Q8CDL9 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Ccdc87Q8CDL9 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc87Q8CDL9 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc87Q8CDL9 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc87Q8CDL9 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc87Q8CDL9 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc87Q8CDL9 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc87Q8CDL9 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Ccdc87Q8CDL9 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc87Q8CDL9 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc87Q8CDL9 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Ccdc87Q8CDL9 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc87Q8CDL9 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC13.4□□□□□ -0.26
Ccdc87Q8CDL9 Gm12291-201ENSMUST00000121627 311 ntBASIC13.4□□□□□ -0.26
Ccdc87Q8CDL9 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc87Q8CDL9 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc87Q8CDL9 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC13.4□□□□□ -0.26
Ccdc87Q8CDL9 Gm17150-201ENSMUST00000165577 381 ntBASIC13.4□□□□□ -0.26
Ccdc87Q8CDL9 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Ccdc87Q8CDL9 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc87Q8CDL9 Gm18916-201ENSMUST00000198264 1246 ntBASIC13.4□□□□□ -0.26
Ccdc87Q8CDL9 Gm6458-201ENSMUST00000211573 635 ntBASIC13.4□□□□□ -0.26
Ccdc87Q8CDL9 Cdk7-205ENSMUST00000225990 1159 ntBASIC13.4□□□□□ -0.26
Ccdc87Q8CDL9 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc87Q8CDL9 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Ccdc87Q8CDL9 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc87Q8CDL9 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Ccdc87Q8CDL9 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc87Q8CDL9 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc87Q8CDL9 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc87Q8CDL9 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc87Q8CDL9 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc87Q8CDL9 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC13.4□□□□□ -0.26
Ccdc87Q8CDL9 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Ccdc87Q8CDL9 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc87Q8CDL9 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc87Q8CDL9 Paupar-201ENSMUST00000194826 3482 ntBASIC13.4□□□□□ -0.26
Ccdc87Q8CDL9 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc87Q8CDL9 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc87Q8CDL9 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc87Q8CDL9 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms