Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC12.51□□□□□ -0.41
Lrif1Q8CDD9 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lrif1Q8CDD9 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.51□□□□□ -0.41
Lrif1Q8CDD9 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.51□□□□□ -0.41
Lrif1Q8CDD9 Gm26464-201ENSMUST00000157094 305 ntBASIC12.51□□□□□ -0.41
Lrif1Q8CDD9 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.51□□□□□ -0.41
Lrif1Q8CDD9 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lrif1Q8CDD9 Gm43094-201ENSMUST00000196549 921 ntBASIC12.51□□□□□ -0.41
Lrif1Q8CDD9 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.51□□□□□ -0.41
Lrif1Q8CDD9 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.51□□□□□ -0.41
Lrif1Q8CDD9 AC162801.1-201ENSMUST00000220612 198 ntBASIC12.51□□□□□ -0.41
Lrif1Q8CDD9 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.51□□□□□ -0.41
Lrif1Q8CDD9 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.51□□□□□ -0.41
Lrif1Q8CDD9 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lrif1Q8CDD9 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Lrif1Q8CDD9 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Lrif1Q8CDD9 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lrif1Q8CDD9 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lrif1Q8CDD9 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lrif1Q8CDD9 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lrif1Q8CDD9 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lrif1Q8CDD9 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lrif1Q8CDD9 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lrif1Q8CDD9 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lrif1Q8CDD9 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Lrif1Q8CDD9 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lrif1Q8CDD9 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Lrif1Q8CDD9 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lrif1Q8CDD9 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.5□□□□□ -0.41
Lrif1Q8CDD9 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lrif1Q8CDD9 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.5□□□□□ -0.41
Lrif1Q8CDD9 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lrif1Q8CDD9 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lrif1Q8CDD9 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Lrif1Q8CDD9 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lrif1Q8CDD9 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lrif1Q8CDD9 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lrif1Q8CDD9 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lrif1Q8CDD9 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lrif1Q8CDD9 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.5□□□□□ -0.41
Lrif1Q8CDD9 Gm12485-201ENSMUST00000119641 291 ntBASIC12.5□□□□□ -0.41
Lrif1Q8CDD9 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.5□□□□□ -0.41
Lrif1Q8CDD9 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.5□□□□□ -0.41
Lrif1Q8CDD9 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Lrif1Q8CDD9 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lrif1Q8CDD9 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lrif1Q8CDD9 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.5□□□□□ -0.41
Lrif1Q8CDD9 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Lrif1Q8CDD9 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lrif1Q8CDD9 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
Lrif1Q8CDD9 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lrif1Q8CDD9 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.5□□□□□ -0.41
Lrif1Q8CDD9 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.5□□□□□ -0.41
Lrif1Q8CDD9 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lrif1Q8CDD9 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lrif1Q8CDD9 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.5□□□□□ -0.41
Lrif1Q8CDD9 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lrif1Q8CDD9 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lrif1Q8CDD9 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lrif1Q8CDD9 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lrif1Q8CDD9 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lrif1Q8CDD9 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lrif1Q8CDD9 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lrif1Q8CDD9 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lrif1Q8CDD9 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lrif1Q8CDD9 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lrif1Q8CDD9 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lrif1Q8CDD9 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lrif1Q8CDD9 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Lrif1Q8CDD9 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.49□□□□□ -0.41
Lrif1Q8CDD9 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lrif1Q8CDD9 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lrif1Q8CDD9 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lrif1Q8CDD9 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lrif1Q8CDD9 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lrif1Q8CDD9 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.49□□□□□ -0.41
Lrif1Q8CDD9 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Lrif1Q8CDD9 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.49□□□□□ -0.41
Lrif1Q8CDD9 Gm14127-201ENSMUST00000117906 678 ntBASIC12.49□□□□□ -0.41
Lrif1Q8CDD9 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.49□□□□□ -0.41
Lrif1Q8CDD9 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Lrif1Q8CDD9 Gm6447-201ENSMUST00000118905 835 ntBASIC12.49□□□□□ -0.41
Lrif1Q8CDD9 Gm15824-201ENSMUST00000119516 955 ntBASIC12.49□□□□□ -0.41
Lrif1Q8CDD9 Mir1894-201ENSMUST00000122802 81 ntBASIC12.49□□□□□ -0.41
Lrif1Q8CDD9 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lrif1Q8CDD9 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lrif1Q8CDD9 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lrif1Q8CDD9 Gm38144-201ENSMUST00000192790 465 ntBASIC12.49□□□□□ -0.41
Lrif1Q8CDD9 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lrif1Q8CDD9 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.49□□□□□ -0.41
Lrif1Q8CDD9 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lrif1Q8CDD9 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lrif1Q8CDD9 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lrif1Q8CDD9 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Lrif1Q8CDD9 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.49□□□□□ -0.41
Lrif1Q8CDD9 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Lrif1Q8CDD9 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lrif1Q8CDD9 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lrif1Q8CDD9 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lrif1Q8CDD9 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms