Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Uba3Q8C878 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Uba3Q8C878 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC13.3□□□□□ -0.28
Uba3Q8C878 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Uba3Q8C878 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Uba3Q8C878 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Uba3Q8C878 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Uba3Q8C878 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Uba3Q8C878 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Uba3Q8C878 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Uba3Q8C878 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Uba3Q8C878 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Uba3Q8C878 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Uba3Q8C878 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.29□□□□□ -0.28
Uba3Q8C878 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Uba3Q8C878 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Uba3Q8C878 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC13.29□□□□□ -0.28
Uba3Q8C878 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Uba3Q8C878 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Uba3Q8C878 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Uba3Q8C878 Gm5940-201ENSMUST00000117582 1068 ntBASIC13.29□□□□□ -0.28
Uba3Q8C878 Gm5863-201ENSMUST00000121760 1008 ntBASIC13.29□□□□□ -0.28
Uba3Q8C878 Gm42627-201ENSMUST00000197347 224 ntBASIC13.29□□□□□ -0.28
Uba3Q8C878 Gm6013-201ENSMUST00000212264 699 ntBASIC13.29□□□□□ -0.28
Uba3Q8C878 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Uba3Q8C878 Gm7399-201ENSMUST00000032395 858 ntBASIC13.29□□□□□ -0.28
Uba3Q8C878 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Uba3Q8C878 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Uba3Q8C878 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Uba3Q8C878 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Uba3Q8C878 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Uba3Q8C878 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Uba3Q8C878 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Uba3Q8C878 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Uba3Q8C878 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Uba3Q8C878 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Uba3Q8C878 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.29□□□□□ -0.28
Uba3Q8C878 AC123834.1-201ENSMUST00000225346 2043 ntBASIC13.29□□□□□ -0.28
Uba3Q8C878 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Uba3Q8C878 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Uba3Q8C878 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Uba3Q8C878 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Uba3Q8C878 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Uba3Q8C878 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Uba3Q8C878 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Uba3Q8C878 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Uba3Q8C878 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Uba3Q8C878 Gm11964-201ENSMUST00000120982 444 ntBASIC13.28□□□□□ -0.28
Uba3Q8C878 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Uba3Q8C878 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC13.28□□□□□ -0.28
Uba3Q8C878 Gm44405-201ENSMUST00000198952 126 ntBASIC13.28□□□□□ -0.28
Uba3Q8C878 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC13.28□□□□□ -0.28
Uba3Q8C878 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC13.28□□□□□ -0.28
Uba3Q8C878 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC13.28□□□□□ -0.28
Uba3Q8C878 Gm45930-201ENSMUST00000221330 292 ntBASIC13.28□□□□□ -0.28
Uba3Q8C878 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Uba3Q8C878 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Uba3Q8C878 Gm8399-201ENSMUST00000082300 1117 ntBASIC13.28□□□□□ -0.28
Uba3Q8C878 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Uba3Q8C878 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Uba3Q8C878 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Uba3Q8C878 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Uba3Q8C878 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Uba3Q8C878 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Uba3Q8C878 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Uba3Q8C878 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Uba3Q8C878 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Uba3Q8C878 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Uba3Q8C878 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Uba3Q8C878 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Uba3Q8C878 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Uba3Q8C878 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Uba3Q8C878 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC13.28□□□□□ -0.28
Uba3Q8C878 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Uba3Q8C878 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Uba3Q8C878 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Uba3Q8C878 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Uba3Q8C878 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Uba3Q8C878 Gm44942-201ENSMUST00000096093 2072 ntBASIC13.27□□□□□ -0.28
Uba3Q8C878 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Uba3Q8C878 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Uba3Q8C878 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
Uba3Q8C878 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Uba3Q8C878 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Uba3Q8C878 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Uba3Q8C878 Gm15703-201ENSMUST00000120250 880 ntBASIC13.27□□□□□ -0.29
Uba3Q8C878 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC13.27□□□□□ -0.29
Uba3Q8C878 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC13.27□□□□□ -0.29
Uba3Q8C878 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC13.27□□□□□ -0.29
Uba3Q8C878 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Uba3Q8C878 Gm8801-201ENSMUST00000173255 1064 ntBASIC13.27□□□□□ -0.29
Uba3Q8C878 Gm27501-201ENSMUST00000183599 107 ntBASIC13.27□□□□□ -0.29
Uba3Q8C878 Gm27516-201ENSMUST00000184237 98 ntBASIC13.27□□□□□ -0.29
Uba3Q8C878 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC13.27□□□□□ -0.29
Uba3Q8C878 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
Uba3Q8C878 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13.27□□□□□ -0.29
Uba3Q8C878 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC13.27□□□□□ -0.29
Uba3Q8C878 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC13.27□□□□□ -0.29
Uba3Q8C878 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Uba3Q8C878 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms