Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a6Q8C6K9 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.39□□□□□ -0.59
Col6a6Q8C6K9 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC11.39□□□□□ -0.59
Col6a6Q8C6K9 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a6Q8C6K9 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a6Q8C6K9 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a6Q8C6K9 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a6Q8C6K9 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a6Q8C6K9 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a6Q8C6K9 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a6Q8C6K9 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a6Q8C6K9 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC11.38□□□□□ -0.59
Col6a6Q8C6K9 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a6Q8C6K9 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a6Q8C6K9 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Col6a6Q8C6K9 Gm11941-201ENSMUST00000119904 610 ntBASIC11.38□□□□□ -0.59
Col6a6Q8C6K9 Mir1901-201ENSMUST00000122616 78 ntBASIC11.38□□□□□ -0.59
Col6a6Q8C6K9 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC11.38□□□□□ -0.59
Col6a6Q8C6K9 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Col6a6Q8C6K9 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a6Q8C6K9 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a6Q8C6K9 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a6Q8C6K9 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a6Q8C6K9 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Col6a6Q8C6K9 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC11.38□□□□□ -0.59
Col6a6Q8C6K9 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a6Q8C6K9 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a6Q8C6K9 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a6Q8C6K9 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC11.38□□□□□ -0.59
Col6a6Q8C6K9 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a6Q8C6K9 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a6Q8C6K9 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a6Q8C6K9 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a6Q8C6K9 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a6Q8C6K9 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a6Q8C6K9 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a6Q8C6K9 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a6Q8C6K9 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a6Q8C6K9 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.38□□□□□ -0.59
Col6a6Q8C6K9 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a6Q8C6K9 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Col6a6Q8C6K9 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a6Q8C6K9 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a6Q8C6K9 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a6Q8C6K9 Gm12196-201ENSMUST00000120954 262 ntBASIC11.38□□□□□ -0.59
Col6a6Q8C6K9 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a6Q8C6K9 Gm23218-201ENSMUST00000158124 276 ntBASIC11.38□□□□□ -0.59
Col6a6Q8C6K9 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC11.38□□□□□ -0.59
Col6a6Q8C6K9 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a6Q8C6K9 CT009713.8-201ENSMUST00000225448 560 ntBASIC11.38□□□□□ -0.59
Col6a6Q8C6K9 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a6Q8C6K9 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Col6a6Q8C6K9 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a6Q8C6K9 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a6Q8C6K9 Gm11960-202ENSMUST00000181063 2858 ntBASIC11.38□□□□□ -0.59
Col6a6Q8C6K9 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a6Q8C6K9 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a6Q8C6K9 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a6Q8C6K9 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a6Q8C6K9 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Col6a6Q8C6K9 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a6Q8C6K9 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a6Q8C6K9 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
Col6a6Q8C6K9 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a6Q8C6K9 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Col6a6Q8C6K9 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a6Q8C6K9 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a6Q8C6K9 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a6Q8C6K9 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a6Q8C6K9 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a6Q8C6K9 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC11.37□□□□□ -0.59
Col6a6Q8C6K9 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a6Q8C6K9 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a6Q8C6K9 Gm12899-201ENSMUST00000120565 551 ntBASIC11.37□□□□□ -0.59
Col6a6Q8C6K9 Gm10774-201ENSMUST00000188689 204 ntBASIC11.37□□□□□ -0.59
Col6a6Q8C6K9 Gm43916-201ENSMUST00000205062 967 ntBASIC11.37□□□□□ -0.59
Col6a6Q8C6K9 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Col6a6Q8C6K9 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Col6a6Q8C6K9 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a6Q8C6K9 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a6Q8C6K9 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
Col6a6Q8C6K9 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a6Q8C6K9 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.37□□□□□ -0.59
Col6a6Q8C6K9 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a6Q8C6K9 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a6Q8C6K9 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a6Q8C6K9 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Col6a6Q8C6K9 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a6Q8C6K9 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC11.37□□□□□ -0.59
Col6a6Q8C6K9 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a6Q8C6K9 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a6Q8C6K9 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a6Q8C6K9 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
Col6a6Q8C6K9 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a6Q8C6K9 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC11.37□□□□□ -0.59
Col6a6Q8C6K9 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a6Q8C6K9 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a6Q8C6K9 Selenot-ps-201ENSMUST00000119098 593 ntBASIC11.37□□□□□ -0.59
Col6a6Q8C6K9 Gm14999-201ENSMUST00000121039 624 ntBASIC11.37□□□□□ -0.59
Col6a6Q8C6K9 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 391 ms