Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc60Q8C4J0 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc60Q8C4J0 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc60Q8C4J0 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc60Q8C4J0 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc60Q8C4J0 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc60Q8C4J0 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
Ccdc60Q8C4J0 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc60Q8C4J0 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc60Q8C4J0 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc60Q8C4J0 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC16.09■□□□□ 0.17
Ccdc60Q8C4J0 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc60Q8C4J0 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc60Q8C4J0 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc60Q8C4J0 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc60Q8C4J0 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc60Q8C4J0 Gm13875-201ENSMUST00000120162 282 ntBASIC16.09■□□□□ 0.17
Ccdc60Q8C4J0 Gm13315-201ENSMUST00000120376 991 ntBASIC16.09■□□□□ 0.17
Ccdc60Q8C4J0 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC16.09■□□□□ 0.17
Ccdc60Q8C4J0 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc60Q8C4J0 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC16.09■□□□□ 0.17
Ccdc60Q8C4J0 Gm8801-201ENSMUST00000173255 1064 ntBASIC16.09■□□□□ 0.17
Ccdc60Q8C4J0 Mospd4-201ENSMUST00000180618 576 ntBASIC16.09■□□□□ 0.17
Ccdc60Q8C4J0 Gm27501-201ENSMUST00000183599 107 ntBASIC16.09■□□□□ 0.17
Ccdc60Q8C4J0 Gm29396-201ENSMUST00000185659 716 ntBASIC16.09■□□□□ 0.17
Ccdc60Q8C4J0 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC16.09■□□□□ 0.17
Ccdc60Q8C4J0 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC16.09■□□□□ 0.17
Ccdc60Q8C4J0 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc60Q8C4J0 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC16.09■□□□□ 0.17
Ccdc60Q8C4J0 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC16.09■□□□□ 0.17
Ccdc60Q8C4J0 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc60Q8C4J0 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc60Q8C4J0 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc60Q8C4J0 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc60Q8C4J0 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc60Q8C4J0 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc60Q8C4J0 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc60Q8C4J0 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc60Q8C4J0 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Ccdc60Q8C4J0 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Ccdc60Q8C4J0 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC16.09■□□□□ 0.17
Ccdc60Q8C4J0 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Ccdc60Q8C4J0 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc60Q8C4J0 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc60Q8C4J0 Gm38355-201ENSMUST00000192514 1570 ntBASIC16.09■□□□□ 0.17
Ccdc60Q8C4J0 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Ccdc60Q8C4J0 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Ccdc60Q8C4J0 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC16.08■□□□□ 0.17
Ccdc60Q8C4J0 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ccdc60Q8C4J0 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ccdc60Q8C4J0 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ccdc60Q8C4J0 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ccdc60Q8C4J0 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ccdc60Q8C4J0 Gm14760-201ENSMUST00000121831 999 ntBASIC16.08■□□□□ 0.16
Ccdc60Q8C4J0 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC16.08■□□□□ 0.16
Ccdc60Q8C4J0 Rmrp-201ENSMUST00000157463 271 ntBASIC16.08■□□□□ 0.16
Ccdc60Q8C4J0 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC16.08■□□□□ 0.16
Ccdc60Q8C4J0 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC16.08■□□□□ 0.16
Ccdc60Q8C4J0 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ccdc60Q8C4J0 AL732506.1-201ENSMUST00000226420 281 ntBASIC16.08■□□□□ 0.16
Ccdc60Q8C4J0 AC169036.1-201ENSMUST00000227994 296 ntBASIC16.08■□□□□ 0.16
Ccdc60Q8C4J0 Gm10371-202ENSMUST00000228010 1081 ntBASIC16.08■□□□□ 0.16
Ccdc60Q8C4J0 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ccdc60Q8C4J0 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ccdc60Q8C4J0 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ccdc60Q8C4J0 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.16
Ccdc60Q8C4J0 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ccdc60Q8C4J0 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ccdc60Q8C4J0 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ccdc60Q8C4J0 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ccdc60Q8C4J0 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ccdc60Q8C4J0 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc60Q8C4J0 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc60Q8C4J0 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc60Q8C4J0 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC16.07■□□□□ 0.16
Ccdc60Q8C4J0 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc60Q8C4J0 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc60Q8C4J0 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
Ccdc60Q8C4J0 Gm24231-201ENSMUST00000104315 133 ntBASIC16.07■□□□□ 0.16
Ccdc60Q8C4J0 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC16.07■□□□□ 0.16
Ccdc60Q8C4J0 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC16.07■□□□□ 0.16
Ccdc60Q8C4J0 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC16.07■□□□□ 0.16
Ccdc60Q8C4J0 Gm27516-201ENSMUST00000184237 98 ntBASIC16.07■□□□□ 0.16
Ccdc60Q8C4J0 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc60Q8C4J0 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Ccdc60Q8C4J0 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc60Q8C4J0 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc60Q8C4J0 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
Ccdc60Q8C4J0 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Ccdc60Q8C4J0 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Ccdc60Q8C4J0 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc60Q8C4J0 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc60Q8C4J0 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc60Q8C4J0 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc60Q8C4J0 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc60Q8C4J0 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Ccdc60Q8C4J0 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc60Q8C4J0 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc60Q8C4J0 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Ccdc60Q8C4J0 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms