Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Tsen54Q8C2A2 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Tsen54Q8C2A2 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC10.6□□□□□ -0.71
Tsen54Q8C2A2 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Tsen54Q8C2A2 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC10.6□□□□□ -0.71
Tsen54Q8C2A2 Gm11557-201ENSMUST00000120200 1008 ntBASIC10.6□□□□□ -0.71
Tsen54Q8C2A2 Gm13385-201ENSMUST00000121089 220 ntBASIC10.6□□□□□ -0.71
Tsen54Q8C2A2 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC10.6□□□□□ -0.71
Tsen54Q8C2A2 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC10.6□□□□□ -0.71
Tsen54Q8C2A2 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC10.6□□□□□ -0.71
Tsen54Q8C2A2 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Tsen54Q8C2A2 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC10.6□□□□□ -0.71
Tsen54Q8C2A2 Gm8927-201ENSMUST00000181978 981 ntBASIC10.6□□□□□ -0.71
Tsen54Q8C2A2 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC10.6□□□□□ -0.71
Tsen54Q8C2A2 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Tsen54Q8C2A2 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC10.6□□□□□ -0.71
Tsen54Q8C2A2 Gm3222-201ENSMUST00000071282 990 ntBASIC10.6□□□□□ -0.71
Tsen54Q8C2A2 Gm2423-201ENSMUST00000074863 733 ntBASIC10.6□□□□□ -0.71
Tsen54Q8C2A2 Gm3695-201ENSMUST00000087222 1009 ntBASIC10.6□□□□□ -0.71
Tsen54Q8C2A2 Mir497b-201ENSMUST00000093601 125 ntBASIC10.6□□□□□ -0.71
Tsen54Q8C2A2 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Tsen54Q8C2A2 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Tsen54Q8C2A2 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Tsen54Q8C2A2 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Tsen54Q8C2A2 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Tsen54Q8C2A2 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Tsen54Q8C2A2 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC10.6□□□□□ -0.71
Tsen54Q8C2A2 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Tsen54Q8C2A2 Gm5780-201ENSMUST00000217774 1834 ntBASIC10.6□□□□□ -0.71
Tsen54Q8C2A2 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Tsen54Q8C2A2 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Tsen54Q8C2A2 Gm42840-201ENSMUST00000200303 2251 ntBASIC10.6□□□□□ -0.71
Tsen54Q8C2A2 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Tsen54Q8C2A2 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Tsen54Q8C2A2 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Tsen54Q8C2A2 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Tsen54Q8C2A2 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC10.6□□□□□ -0.71
Tsen54Q8C2A2 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Tsen54Q8C2A2 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Tsen54Q8C2A2 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Tsen54Q8C2A2 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Tsen54Q8C2A2 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Tsen54Q8C2A2 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Tsen54Q8C2A2 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Tsen54Q8C2A2 Gm43721-201ENSMUST00000199677 2313 ntBASIC10.59□□□□□ -0.71
Tsen54Q8C2A2 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Tsen54Q8C2A2 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Tsen54Q8C2A2 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Tsen54Q8C2A2 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC10.59□□□□□ -0.71
Tsen54Q8C2A2 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC10.59□□□□□ -0.71
Tsen54Q8C2A2 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Tsen54Q8C2A2 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Tsen54Q8C2A2 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Tsen54Q8C2A2 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Tsen54Q8C2A2 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Tsen54Q8C2A2 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Tsen54Q8C2A2 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC10.59□□□□□ -0.71
Tsen54Q8C2A2 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Tsen54Q8C2A2 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Tsen54Q8C2A2 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Tsen54Q8C2A2 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Tsen54Q8C2A2 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Tsen54Q8C2A2 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Tsen54Q8C2A2 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Tsen54Q8C2A2 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Tsen54Q8C2A2 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Tsen54Q8C2A2 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Tsen54Q8C2A2 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Tsen54Q8C2A2 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Tsen54Q8C2A2 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Tsen54Q8C2A2 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Tsen54Q8C2A2 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Tsen54Q8C2A2 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Tsen54Q8C2A2 Gm22189-201ENSMUST00000103822 86 ntBASIC10.59□□□□□ -0.71
Tsen54Q8C2A2 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC10.59□□□□□ -0.71
Tsen54Q8C2A2 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Tsen54Q8C2A2 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC10.59□□□□□ -0.71
Tsen54Q8C2A2 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC10.59□□□□□ -0.71
Tsen54Q8C2A2 Gm24420-201ENSMUST00000176676 59 ntBASIC10.59□□□□□ -0.71
Tsen54Q8C2A2 Gm28760-201ENSMUST00000185995 736 ntBASIC10.59□□□□□ -0.71
Tsen54Q8C2A2 Gm4971-201ENSMUST00000205991 1108 ntBASIC10.59□□□□□ -0.71
Tsen54Q8C2A2 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC10.59□□□□□ -0.71
Tsen54Q8C2A2 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Tsen54Q8C2A2 Gm6218-201ENSMUST00000219812 628 ntBASIC10.59□□□□□ -0.71
Tsen54Q8C2A2 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Tsen54Q8C2A2 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Tsen54Q8C2A2 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Tsen54Q8C2A2 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Tsen54Q8C2A2 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Tsen54Q8C2A2 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Tsen54Q8C2A2 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Tsen54Q8C2A2 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Tsen54Q8C2A2 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Tsen54Q8C2A2 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Tsen54Q8C2A2 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Tsen54Q8C2A2 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Tsen54Q8C2A2 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Tsen54Q8C2A2 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Tsen54Q8C2A2 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Tsen54Q8C2A2 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms