Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm43721-201ENSMUST00000199677 2313 ntBASIC13.02□□□□□ -0.33
Trub1Q8C0D0 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trub1Q8C0D0 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trub1Q8C0D0 Dctn4-202ENSMUST00000223590 1530 ntBASIC13.02□□□□□ -0.33
Trub1Q8C0D0 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC13.02□□□□□ -0.33
Trub1Q8C0D0 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trub1Q8C0D0 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC13.02□□□□□ -0.33
Trub1Q8C0D0 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trub1Q8C0D0 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trub1Q8C0D0 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trub1Q8C0D0 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trub1Q8C0D0 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trub1Q8C0D0 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trub1Q8C0D0 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trub1Q8C0D0 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trub1Q8C0D0 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trub1Q8C0D0 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trub1Q8C0D0 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trub1Q8C0D0 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trub1Q8C0D0 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trub1Q8C0D0 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC13.01□□□□□ -0.33
Trub1Q8C0D0 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC13.01□□□□□ -0.33
Trub1Q8C0D0 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC13.01□□□□□ -0.33
Trub1Q8C0D0 Rmrp-201ENSMUST00000157463 271 ntBASIC13.01□□□□□ -0.33
Trub1Q8C0D0 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trub1Q8C0D0 Gm8565-201ENSMUST00000183259 1014 ntBASIC13.01□□□□□ -0.33
Trub1Q8C0D0 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trub1Q8C0D0 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC13.01□□□□□ -0.33
Trub1Q8C0D0 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC13.01□□□□□ -0.33
Trub1Q8C0D0 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trub1Q8C0D0 AL732506.1-201ENSMUST00000226420 281 ntBASIC13.01□□□□□ -0.33
Trub1Q8C0D0 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trub1Q8C0D0 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trub1Q8C0D0 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trub1Q8C0D0 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trub1Q8C0D0 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trub1Q8C0D0 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC13.01□□□□□ -0.33
Trub1Q8C0D0 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trub1Q8C0D0 Gm12846-201ENSMUST00000120431 1373 ntBASIC13.01□□□□□ -0.33
Trub1Q8C0D0 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC13.01□□□□□ -0.33
Trub1Q8C0D0 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trub1Q8C0D0 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trub1Q8C0D0 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trub1Q8C0D0 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trub1Q8C0D0 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trub1Q8C0D0 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trub1Q8C0D0 Gm20554-201ENSMUST00000177421 2352 ntBASIC13.01□□□□□ -0.33
Trub1Q8C0D0 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trub1Q8C0D0 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trub1Q8C0D0 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trub1Q8C0D0 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trub1Q8C0D0 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trub1Q8C0D0 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.01□□□□□ -0.33
Trub1Q8C0D0 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trub1Q8C0D0 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trub1Q8C0D0 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trub1Q8C0D0 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trub1Q8C0D0 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Trub1Q8C0D0 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC13□□□□□ -0.33
Trub1Q8C0D0 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trub1Q8C0D0 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trub1Q8C0D0 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13□□□□□ -0.33
Trub1Q8C0D0 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trub1Q8C0D0 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trub1Q8C0D0 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trub1Q8C0D0 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Trub1Q8C0D0 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trub1Q8C0D0 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trub1Q8C0D0 CT009757.3-201ENSMUST00000223367 2320 ntBASIC13□□□□□ -0.33
Trub1Q8C0D0 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trub1Q8C0D0 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trub1Q8C0D0 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trub1Q8C0D0 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trub1Q8C0D0 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC13□□□□□ -0.33
Trub1Q8C0D0 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trub1Q8C0D0 Gm37324-201ENSMUST00000194500 4504 ntBASIC13□□□□□ -0.33
Trub1Q8C0D0 Gm7789-202ENSMUST00000211273 1400 ntBASIC13□□□□□ -0.33
Trub1Q8C0D0 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC13□□□□□ -0.33
Trub1Q8C0D0 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trub1Q8C0D0 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trub1Q8C0D0 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC13□□□□□ -0.33
Trub1Q8C0D0 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trub1Q8C0D0 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trub1Q8C0D0 Gm11425-201ENSMUST00000119608 498 ntBASIC13□□□□□ -0.33
Trub1Q8C0D0 Gm9431-201ENSMUST00000119765 1051 ntBASIC13□□□□□ -0.33
Trub1Q8C0D0 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trub1Q8C0D0 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trub1Q8C0D0 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trub1Q8C0D0 AC108416.1-202ENSMUST00000228927 1201 ntBASIC13□□□□□ -0.33
Trub1Q8C0D0 Gm9396-201ENSMUST00000076703 567 ntBASIC13□□□□□ -0.33
Trub1Q8C0D0 Gm22058-201ENSMUST00000083393 310 ntBASIC13□□□□□ -0.33
Trub1Q8C0D0 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trub1Q8C0D0 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trub1Q8C0D0 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trub1Q8C0D0 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trub1Q8C0D0 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC13□□□□□ -0.33
Trub1Q8C0D0 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trub1Q8C0D0 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Trub1Q8C0D0 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC13□□□□□ -0.33
Trub1Q8C0D0 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms