Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vrk1Q80X41 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.1□□□□□ -0.47
Vrk1Q80X41 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.1□□□□□ -0.47
Vrk1Q80X41 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.1□□□□□ -0.47
Vrk1Q80X41 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vrk1Q80X41 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Vrk1Q80X41 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.1□□□□□ -0.47
Vrk1Q80X41 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.1□□□□□ -0.47
Vrk1Q80X41 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.1□□□□□ -0.47
Vrk1Q80X41 Gm37201-201ENSMUST00000191845 523 ntBASIC12.1□□□□□ -0.47
Vrk1Q80X41 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.1□□□□□ -0.47
Vrk1Q80X41 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Vrk1Q80X41 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.1□□□□□ -0.47
Vrk1Q80X41 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC12.1□□□□□ -0.47
Vrk1Q80X41 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.1□□□□□ -0.47
Vrk1Q80X41 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vrk1Q80X41 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Vrk1Q80X41 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Vrk1Q80X41 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vrk1Q80X41 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Vrk1Q80X41 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vrk1Q80X41 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vrk1Q80X41 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Vrk1Q80X41 Gm5846-201ENSMUST00000193146 1414 ntBASIC12.1□□□□□ -0.47
Vrk1Q80X41 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Vrk1Q80X41 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vrk1Q80X41 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.1□□□□□ -0.47
Vrk1Q80X41 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Vrk1Q80X41 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vrk1Q80X41 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vrk1Q80X41 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vrk1Q80X41 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vrk1Q80X41 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vrk1Q80X41 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Vrk1Q80X41 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vrk1Q80X41 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vrk1Q80X41 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Vrk1Q80X41 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vrk1Q80X41 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vrk1Q80X41 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Vrk1Q80X41 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Vrk1Q80X41 Gm13736-201ENSMUST00000119272 253 ntBASIC12.09□□□□□ -0.47
Vrk1Q80X41 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.09□□□□□ -0.47
Vrk1Q80X41 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Vrk1Q80X41 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vrk1Q80X41 Gm26361-201ENSMUST00000158868 186 ntBASIC12.09□□□□□ -0.47
Vrk1Q80X41 Mir3547-201ENSMUST00000175461 88 ntBASIC12.09□□□□□ -0.47
Vrk1Q80X41 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Vrk1Q80X41 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Vrk1Q80X41 Gm19208-201ENSMUST00000213861 912 ntBASIC12.09□□□□□ -0.47
Vrk1Q80X41 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.09□□□□□ -0.47
Vrk1Q80X41 Gm8712-201ENSMUST00000221090 701 ntBASIC12.09□□□□□ -0.47
Vrk1Q80X41 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.09□□□□□ -0.47
Vrk1Q80X41 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vrk1Q80X41 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vrk1Q80X41 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vrk1Q80X41 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Vrk1Q80X41 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.09□□□□□ -0.47
Vrk1Q80X41 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.09□□□□□ -0.47
Vrk1Q80X41 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Vrk1Q80X41 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.09□□□□□ -0.47
Vrk1Q80X41 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Vrk1Q80X41 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Vrk1Q80X41 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Vrk1Q80X41 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Vrk1Q80X41 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vrk1Q80X41 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Vrk1Q80X41 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vrk1Q80X41 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vrk1Q80X41 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Vrk1Q80X41 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vrk1Q80X41 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vrk1Q80X41 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vrk1Q80X41 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Vrk1Q80X41 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Vrk1Q80X41 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
Vrk1Q80X41 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Vrk1Q80X41 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Vrk1Q80X41 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Vrk1Q80X41 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Vrk1Q80X41 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vrk1Q80X41 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vrk1Q80X41 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vrk1Q80X41 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vrk1Q80X41 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vrk1Q80X41 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vrk1Q80X41 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vrk1Q80X41 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Vrk1Q80X41 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vrk1Q80X41 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vrk1Q80X41 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Vrk1Q80X41 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Vrk1Q80X41 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vrk1Q80X41 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vrk1Q80X41 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Vrk1Q80X41 Gm4760-201ENSMUST00000119663 1030 ntBASIC12.08□□□□□ -0.48
Vrk1Q80X41 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC12.08□□□□□ -0.48
Vrk1Q80X41 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Vrk1Q80X41 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.08□□□□□ -0.48
Vrk1Q80X41 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms