Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh19Q80TF3 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.42□□□□□ -0.42
Pcdh19Q80TF3 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.42□□□□□ -0.42
Pcdh19Q80TF3 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.42□□□□□ -0.42
Pcdh19Q80TF3 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Pcdh19Q80TF3 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh19Q80TF3 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.42□□□□□ -0.42
Pcdh19Q80TF3 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.42□□□□□ -0.42
Pcdh19Q80TF3 Gm21156-201ENSMUST00000189693 869 ntBASIC12.42□□□□□ -0.42
Pcdh19Q80TF3 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC12.42□□□□□ -0.42
Pcdh19Q80TF3 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.42□□□□□ -0.42
Pcdh19Q80TF3 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.42□□□□□ -0.42
Pcdh19Q80TF3 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.42□□□□□ -0.42
Pcdh19Q80TF3 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.42□□□□□ -0.42
Pcdh19Q80TF3 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh19Q80TF3 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh19Q80TF3 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Pcdh19Q80TF3 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Pcdh19Q80TF3 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.42□□□□□ -0.42
Pcdh19Q80TF3 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh19Q80TF3 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh19Q80TF3 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh19Q80TF3 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh19Q80TF3 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh19Q80TF3 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh19Q80TF3 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh19Q80TF3 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh19Q80TF3 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh19Q80TF3 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh19Q80TF3 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh19Q80TF3 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh19Q80TF3 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh19Q80TF3 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh19Q80TF3 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Pcdh19Q80TF3 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh19Q80TF3 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh19Q80TF3 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh19Q80TF3 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh19Q80TF3 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh19Q80TF3 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh19Q80TF3 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh19Q80TF3 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Pcdh19Q80TF3 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh19Q80TF3 Gm15808-201ENSMUST00000119046 604 ntBASIC12.41□□□□□ -0.42
Pcdh19Q80TF3 Gm14716-201ENSMUST00000120138 718 ntBASIC12.41□□□□□ -0.42
Pcdh19Q80TF3 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh19Q80TF3 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh19Q80TF3 Gm16296-201ENSMUST00000159905 325 ntBASIC12.41□□□□□ -0.42
Pcdh19Q80TF3 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh19Q80TF3 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.41□□□□□ -0.42
Pcdh19Q80TF3 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh19Q80TF3 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.41□□□□□ -0.42
Pcdh19Q80TF3 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.41□□□□□ -0.42
Pcdh19Q80TF3 Gm36991-201ENSMUST00000191800 648 ntBASIC12.41□□□□□ -0.42
Pcdh19Q80TF3 Gm38241-201ENSMUST00000192641 898 ntBASIC12.41□□□□□ -0.42
Pcdh19Q80TF3 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.41□□□□□ -0.42
Pcdh19Q80TF3 Gm5950-201ENSMUST00000213337 772 ntBASIC12.41□□□□□ -0.42
Pcdh19Q80TF3 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh19Q80TF3 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh19Q80TF3 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh19Q80TF3 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh19Q80TF3 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh19Q80TF3 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh19Q80TF3 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Pcdh19Q80TF3 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh19Q80TF3 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh19Q80TF3 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.41□□□□□ -0.42
Pcdh19Q80TF3 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.41□□□□□ -0.42
Pcdh19Q80TF3 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh19Q80TF3 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh19Q80TF3 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh19Q80TF3 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh19Q80TF3 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Pcdh19Q80TF3 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh19Q80TF3 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh19Q80TF3 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh19Q80TF3 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh19Q80TF3 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh19Q80TF3 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh19Q80TF3 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh19Q80TF3 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.41□□□□□ -0.42
Pcdh19Q80TF3 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Pcdh19Q80TF3 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh19Q80TF3 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Pcdh19Q80TF3 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh19Q80TF3 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh19Q80TF3 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh19Q80TF3 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Pcdh19Q80TF3 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh19Q80TF3 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh19Q80TF3 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.41□□□□□ -0.42
Pcdh19Q80TF3 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh19Q80TF3 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh19Q80TF3 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh19Q80TF3 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh19Q80TF3 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.4□□□□□ -0.42
Pcdh19Q80TF3 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh19Q80TF3 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh19Q80TF3 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh19Q80TF3 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms