Protein–RNA interactions for Protein: Q7M732

Rtl1, Retrotransposon-like protein 1, mousemouse

Predictions only

Length 1,744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl1Q7M732 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rtl1Q7M732 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rtl1Q7M732 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rtl1Q7M732 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rtl1Q7M732 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC22.21■■□□□ 1.15
Rtl1Q7M732 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
Rtl1Q7M732 Gm4909-201ENSMUST00000118749 794 ntBASIC22.2■■□□□ 1.14
Rtl1Q7M732 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC22.2■■□□□ 1.14
Rtl1Q7M732 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC22.2■■□□□ 1.14
Rtl1Q7M732 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC22.2■■□□□ 1.14
Rtl1Q7M732 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC22.2■■□□□ 1.14
Rtl1Q7M732 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC22.2■■□□□ 1.14
Rtl1Q7M732 AC153954.1-201ENSMUST00000216959 255 ntBASIC22.2■■□□□ 1.14
Rtl1Q7M732 CT571245.2-201ENSMUST00000218421 305 ntBASIC22.2■■□□□ 1.14
Rtl1Q7M732 CT025694.1-201ENSMUST00000226188 934 ntBASIC22.2■■□□□ 1.14
Rtl1Q7M732 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rtl1Q7M732 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC22.2■■□□□ 1.14
Rtl1Q7M732 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rtl1Q7M732 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rtl1Q7M732 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rtl1Q7M732 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rtl1Q7M732 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
Rtl1Q7M732 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rtl1Q7M732 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC22.2■■□□□ 1.14
Rtl1Q7M732 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rtl1Q7M732 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC22.19■■□□□ 1.14
Rtl1Q7M732 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC22.19■■□□□ 1.14
Rtl1Q7M732 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC22.19■■□□□ 1.14
Rtl1Q7M732 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Rtl1Q7M732 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Rtl1Q7M732 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Rtl1Q7M732 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Rtl1Q7M732 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Rtl1Q7M732 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Rtl1Q7M732 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Rtl1Q7M732 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Rtl1Q7M732 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Rtl1Q7M732 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Rtl1Q7M732 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Rtl1Q7M732 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC22.19■■□□□ 1.14
Rtl1Q7M732 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
Rtl1Q7M732 Gm27530-201ENSMUST00000184096 98 ntBASIC22.19■■□□□ 1.14
Rtl1Q7M732 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Rtl1Q7M732 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Rtl1Q7M732 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Rtl1Q7M732 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC22.19■■□□□ 1.14
Rtl1Q7M732 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
Rtl1Q7M732 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
Rtl1Q7M732 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Rtl1Q7M732 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC22.18■■□□□ 1.14
Rtl1Q7M732 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rtl1Q7M732 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rtl1Q7M732 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC22.18■■□□□ 1.14
Rtl1Q7M732 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC22.18■■□□□ 1.14
Rtl1Q7M732 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC22.18■■□□□ 1.14
Rtl1Q7M732 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rtl1Q7M732 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC22.18■■□□□ 1.14
Rtl1Q7M732 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rtl1Q7M732 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
Rtl1Q7M732 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rtl1Q7M732 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rtl1Q7M732 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rtl1Q7M732 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rtl1Q7M732 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rtl1Q7M732 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rtl1Q7M732 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
Rtl1Q7M732 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Rtl1Q7M732 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Rtl1Q7M732 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rtl1Q7M732 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC22.17■■□□□ 1.14
Rtl1Q7M732 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC22.17■■□□□ 1.14
Rtl1Q7M732 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC22.17■■□□□ 1.14
Rtl1Q7M732 Mir5120-201ENSMUST00000175020 78 ntBASIC22.17■■□□□ 1.14
Rtl1Q7M732 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Rtl1Q7M732 Gm27627-201ENSMUST00000183644 150 ntBASIC22.17■■□□□ 1.14
Rtl1Q7M732 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Rtl1Q7M732 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC22.17■■□□□ 1.14
Rtl1Q7M732 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC22.17■■□□□ 1.14
Rtl1Q7M732 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC22.17■■□□□ 1.14
Rtl1Q7M732 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Rtl1Q7M732 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rtl1Q7M732 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Rtl1Q7M732 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rtl1Q7M732 CT009757.3-201ENSMUST00000223367 2320 ntBASIC22.17■■□□□ 1.14
Rtl1Q7M732 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rtl1Q7M732 Gm17040-202ENSMUST00000170597 889 ntBASIC22.17■■□□□ 1.14
Rtl1Q7M732 Gm3786-201ENSMUST00000202659 378 ntBASIC22.17■■□□□ 1.14
Rtl1Q7M732 Abhd11os-203ENSMUST00000222613 363 ntBASIC22.17■■□□□ 1.14
Rtl1Q7M732 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
Rtl1Q7M732 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rtl1Q7M732 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC22.17■■□□□ 1.14
Rtl1Q7M732 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Rtl1Q7M732 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Rtl1Q7M732 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Rtl1Q7M732 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Rtl1Q7M732 AC159308.2-201ENSMUST00000213592 2325 ntBASIC22.16■■□□□ 1.14
Rtl1Q7M732 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
Rtl1Q7M732 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Rtl1Q7M732 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
Rtl1Q7M732 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms