Protein–RNA interactions for Protein: Q6ZWR6

Syne1, Nesprin-1, mousemouse

Predictions only

Length 8,799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1Q6ZWR6 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Syne1Q6ZWR6 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Syne1Q6ZWR6 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Syne1Q6ZWR6 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Syne1Q6ZWR6 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Syne1Q6ZWR6 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
Syne1Q6ZWR6 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Syne1Q6ZWR6 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Syne1Q6ZWR6 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC4.29□□□□□ -1.72
Syne1Q6ZWR6 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Syne1Q6ZWR6 Gm44126-201ENSMUST00000204831 514 ntBASIC4.29□□□□□ -1.72
Syne1Q6ZWR6 Gm45433-201ENSMUST00000209386 247 ntBASIC4.29□□□□□ -1.72
Syne1Q6ZWR6 AC173210.1-201ENSMUST00000222341 1131 ntBASIC4.29□□□□□ -1.72
Syne1Q6ZWR6 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Syne1Q6ZWR6 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Syne1Q6ZWR6 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
Syne1Q6ZWR6 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Syne1Q6ZWR6 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
Syne1Q6ZWR6 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Syne1Q6ZWR6 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
Syne1Q6ZWR6 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
Syne1Q6ZWR6 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Syne1Q6ZWR6 Gm28388-201ENSMUST00000186262 437 ntBASIC4.29□□□□□ -1.72
Syne1Q6ZWR6 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Syne1Q6ZWR6 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Syne1Q6ZWR6 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Syne1Q6ZWR6 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Syne1Q6ZWR6 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Syne1Q6ZWR6 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
Syne1Q6ZWR6 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
Syne1Q6ZWR6 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC4.29□□□□□ -1.72
Syne1Q6ZWR6 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Syne1Q6ZWR6 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC4.29□□□□□ -1.72
Syne1Q6ZWR6 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Syne1Q6ZWR6 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC4.29□□□□□ -1.72
Syne1Q6ZWR6 Gm5070-201ENSMUST00000177599 862 ntBASIC4.29□□□□□ -1.72
Syne1Q6ZWR6 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Syne1Q6ZWR6 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Syne1Q6ZWR6 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC4.29□□□□□ -1.72
Syne1Q6ZWR6 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC4.29□□□□□ -1.72
Syne1Q6ZWR6 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Syne1Q6ZWR6 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Syne1Q6ZWR6 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Syne1Q6ZWR6 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC4.29□□□□□ -1.72
Syne1Q6ZWR6 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
Syne1Q6ZWR6 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Syne1Q6ZWR6 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Syne1Q6ZWR6 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC4.29□□□□□ -1.72
Syne1Q6ZWR6 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Syne1Q6ZWR6 Gm12208-201ENSMUST00000122004 163 ntBASIC4.29□□□□□ -1.72
Syne1Q6ZWR6 Gm6254-201ENSMUST00000168178 1072 ntBASIC4.29□□□□□ -1.72
Syne1Q6ZWR6 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC4.29□□□□□ -1.72
Syne1Q6ZWR6 Gm6781-201ENSMUST00000038304 1242 ntBASIC4.29□□□□□ -1.72
Syne1Q6ZWR6 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC4.29□□□□□ -1.72
Syne1Q6ZWR6 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Syne1Q6ZWR6 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Syne1Q6ZWR6 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Syne1Q6ZWR6 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC4.29□□□□□ -1.72
Syne1Q6ZWR6 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Syne1Q6ZWR6 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC4.28□□□□□ -1.72
Syne1Q6ZWR6 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Syne1Q6ZWR6 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
Syne1Q6ZWR6 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC4.28□□□□□ -1.72
Syne1Q6ZWR6 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
Syne1Q6ZWR6 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
Syne1Q6ZWR6 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Syne1Q6ZWR6 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
Syne1Q6ZWR6 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
Syne1Q6ZWR6 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
Syne1Q6ZWR6 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Syne1Q6ZWR6 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Syne1Q6ZWR6 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC4.28□□□□□ -1.72
Syne1Q6ZWR6 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC4.28□□□□□ -1.72
Syne1Q6ZWR6 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC4.28□□□□□ -1.72
Syne1Q6ZWR6 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Syne1Q6ZWR6 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Syne1Q6ZWR6 Gm11960-202ENSMUST00000181063 2858 ntBASIC4.28□□□□□ -1.72
Syne1Q6ZWR6 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
Syne1Q6ZWR6 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
Syne1Q6ZWR6 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Syne1Q6ZWR6 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Syne1Q6ZWR6 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Syne1Q6ZWR6 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
Syne1Q6ZWR6 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Syne1Q6ZWR6 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Syne1Q6ZWR6 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Syne1Q6ZWR6 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Syne1Q6ZWR6 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
Syne1Q6ZWR6 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
Syne1Q6ZWR6 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC4.28□□□□□ -1.72
Syne1Q6ZWR6 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC4.28□□□□□ -1.72
Syne1Q6ZWR6 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC4.28□□□□□ -1.72
Syne1Q6ZWR6 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
Syne1Q6ZWR6 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC4.28□□□□□ -1.72
Syne1Q6ZWR6 AC166344.1-202ENSMUST00000224139 234 ntBASIC4.28□□□□□ -1.72
Syne1Q6ZWR6 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC4.28□□□□□ -1.72
Syne1Q6ZWR6 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Syne1Q6ZWR6 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Syne1Q6ZWR6 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
Syne1Q6ZWR6 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms