Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Scaf4Q6PFF0 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scaf4Q6PFF0 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scaf4Q6PFF0 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scaf4Q6PFF0 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scaf4Q6PFF0 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.44□□□□□ -0.42
Scaf4Q6PFF0 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Scaf4Q6PFF0 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Scaf4Q6PFF0 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scaf4Q6PFF0 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scaf4Q6PFF0 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Scaf4Q6PFF0 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Scaf4Q6PFF0 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Scaf4Q6PFF0 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC12.44□□□□□ -0.42
Scaf4Q6PFF0 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Scaf4Q6PFF0 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.44□□□□□ -0.42
Scaf4Q6PFF0 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Scaf4Q6PFF0 Mir7654-201ENSMUST00000185082 70 ntBASIC12.44□□□□□ -0.42
Scaf4Q6PFF0 Gm42599-201ENSMUST00000201308 469 ntBASIC12.44□□□□□ -0.42
Scaf4Q6PFF0 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.44□□□□□ -0.42
Scaf4Q6PFF0 Gm18473-201ENSMUST00000220543 868 ntBASIC12.44□□□□□ -0.42
Scaf4Q6PFF0 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Scaf4Q6PFF0 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Scaf4Q6PFF0 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scaf4Q6PFF0 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scaf4Q6PFF0 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
Scaf4Q6PFF0 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scaf4Q6PFF0 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scaf4Q6PFF0 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.44□□□□□ -0.42
Scaf4Q6PFF0 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scaf4Q6PFF0 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scaf4Q6PFF0 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scaf4Q6PFF0 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scaf4Q6PFF0 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scaf4Q6PFF0 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
Scaf4Q6PFF0 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scaf4Q6PFF0 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scaf4Q6PFF0 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Scaf4Q6PFF0 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Scaf4Q6PFF0 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scaf4Q6PFF0 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.43□□□□□ -0.42
Scaf4Q6PFF0 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scaf4Q6PFF0 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Scaf4Q6PFF0 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Scaf4Q6PFF0 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Scaf4Q6PFF0 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scaf4Q6PFF0 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scaf4Q6PFF0 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
Scaf4Q6PFF0 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.43□□□□□ -0.42
Scaf4Q6PFF0 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Scaf4Q6PFF0 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.43□□□□□ -0.42
Scaf4Q6PFF0 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.43□□□□□ -0.42
Scaf4Q6PFF0 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scaf4Q6PFF0 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Scaf4Q6PFF0 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.43□□□□□ -0.42
Scaf4Q6PFF0 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scaf4Q6PFF0 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scaf4Q6PFF0 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scaf4Q6PFF0 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Scaf4Q6PFF0 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC12.43□□□□□ -0.42
Scaf4Q6PFF0 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.43□□□□□ -0.42
Scaf4Q6PFF0 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Scaf4Q6PFF0 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Scaf4Q6PFF0 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.43□□□□□ -0.42
Scaf4Q6PFF0 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scaf4Q6PFF0 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Scaf4Q6PFF0 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.43□□□□□ -0.42
Scaf4Q6PFF0 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Scaf4Q6PFF0 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scaf4Q6PFF0 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scaf4Q6PFF0 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scaf4Q6PFF0 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.43□□□□□ -0.42
Scaf4Q6PFF0 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scaf4Q6PFF0 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scaf4Q6PFF0 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Scaf4Q6PFF0 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Scaf4Q6PFF0 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scaf4Q6PFF0 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scaf4Q6PFF0 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scaf4Q6PFF0 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scaf4Q6PFF0 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scaf4Q6PFF0 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.42□□□□□ -0.42
Scaf4Q6PFF0 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scaf4Q6PFF0 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scaf4Q6PFF0 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC12.42□□□□□ -0.42
Scaf4Q6PFF0 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scaf4Q6PFF0 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Scaf4Q6PFF0 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scaf4Q6PFF0 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scaf4Q6PFF0 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Scaf4Q6PFF0 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Scaf4Q6PFF0 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.42□□□□□ -0.42
Scaf4Q6PFF0 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.42□□□□□ -0.42
Scaf4Q6PFF0 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.42□□□□□ -0.42
Scaf4Q6PFF0 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.42□□□□□ -0.42
Scaf4Q6PFF0 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.42□□□□□ -0.42
Scaf4Q6PFF0 Gm6218-201ENSMUST00000219812 628 ntBASIC12.42□□□□□ -0.42
Scaf4Q6PFF0 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.42□□□□□ -0.42
Scaf4Q6PFF0 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Scaf4Q6PFF0 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms