Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Snrnp40Q6PE01 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.09□□□□□ -0.63
Snrnp40Q6PE01 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Snrnp40Q6PE01 AC122314.1-201ENSMUST00000223056 2239 ntBASIC11.09□□□□□ -0.63
Snrnp40Q6PE01 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Snrnp40Q6PE01 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Snrnp40Q6PE01 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Snrnp40Q6PE01 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Snrnp40Q6PE01 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Snrnp40Q6PE01 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC11.09□□□□□ -0.63
Snrnp40Q6PE01 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Snrnp40Q6PE01 CT025610.1-201ENSMUST00000224552 1786 ntBASIC11.09□□□□□ -0.63
Snrnp40Q6PE01 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Snrnp40Q6PE01 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Snrnp40Q6PE01 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.09□□□□□ -0.63
Snrnp40Q6PE01 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
Snrnp40Q6PE01 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Snrnp40Q6PE01 Gm6580-201ENSMUST00000117504 1357 ntBASIC11.09□□□□□ -0.63
Snrnp40Q6PE01 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Snrnp40Q6PE01 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Snrnp40Q6PE01 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Snrnp40Q6PE01 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC11.09□□□□□ -0.63
Snrnp40Q6PE01 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Snrnp40Q6PE01 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC11.09□□□□□ -0.63
Snrnp40Q6PE01 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
Snrnp40Q6PE01 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Snrnp40Q6PE01 Gm18038-201ENSMUST00000197900 485 ntBASIC11.09□□□□□ -0.63
Snrnp40Q6PE01 Gm45219-201ENSMUST00000205602 465 ntBASIC11.09□□□□□ -0.63
Snrnp40Q6PE01 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.09□□□□□ -0.63
Snrnp40Q6PE01 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.09□□□□□ -0.63
Snrnp40Q6PE01 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Snrnp40Q6PE01 Gm21811-201ENSMUST00000096485 930 ntBASIC11.09□□□□□ -0.63
Snrnp40Q6PE01 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Snrnp40Q6PE01 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Snrnp40Q6PE01 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Snrnp40Q6PE01 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Snrnp40Q6PE01 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Snrnp40Q6PE01 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Snrnp40Q6PE01 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Snrnp40Q6PE01 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Snrnp40Q6PE01 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Snrnp40Q6PE01 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Snrnp40Q6PE01 Gm15459-201ENSMUST00000117405 1941 ntBASIC11.09□□□□□ -0.63
Snrnp40Q6PE01 Gm8355-201ENSMUST00000177767 1941 ntBASIC11.09□□□□□ -0.63
Snrnp40Q6PE01 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Snrnp40Q6PE01 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Snrnp40Q6PE01 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Snrnp40Q6PE01 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
Snrnp40Q6PE01 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Snrnp40Q6PE01 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Snrnp40Q6PE01 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Snrnp40Q6PE01 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Snrnp40Q6PE01 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.09□□□□□ -0.63
Snrnp40Q6PE01 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Snrnp40Q6PE01 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC11.09□□□□□ -0.63
Snrnp40Q6PE01 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Snrnp40Q6PE01 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Snrnp40Q6PE01 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Snrnp40Q6PE01 Gm8798-201ENSMUST00000211877 1661 ntBASIC11.08□□□□□ -0.64
Snrnp40Q6PE01 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Snrnp40Q6PE01 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC11.08□□□□□ -0.64
Snrnp40Q6PE01 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Snrnp40Q6PE01 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Snrnp40Q6PE01 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Snrnp40Q6PE01 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Snrnp40Q6PE01 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Snrnp40Q6PE01 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Snrnp40Q6PE01 Gm22133-201ENSMUST00000102082 109 ntBASIC11.08□□□□□ -0.64
Snrnp40Q6PE01 Mir680-2-201ENSMUST00000102163 110 ntBASIC11.08□□□□□ -0.64
Snrnp40Q6PE01 Gm23251-201ENSMUST00000103773 110 ntBASIC11.08□□□□□ -0.64
Snrnp40Q6PE01 Gm11989-201ENSMUST00000117240 672 ntBASIC11.08□□□□□ -0.64
Snrnp40Q6PE01 Gm11362-201ENSMUST00000118838 850 ntBASIC11.08□□□□□ -0.64
Snrnp40Q6PE01 Gm11941-201ENSMUST00000119904 610 ntBASIC11.08□□□□□ -0.64
Snrnp40Q6PE01 Gm12029-201ENSMUST00000120073 832 ntBASIC11.08□□□□□ -0.64
Snrnp40Q6PE01 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC11.08□□□□□ -0.64
Snrnp40Q6PE01 Rmrp-201ENSMUST00000157463 271 ntBASIC11.08□□□□□ -0.64
Snrnp40Q6PE01 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Snrnp40Q6PE01 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.08□□□□□ -0.64
Snrnp40Q6PE01 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Snrnp40Q6PE01 Gm43058-201ENSMUST00000197645 625 ntBASIC11.08□□□□□ -0.64
Snrnp40Q6PE01 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC11.08□□□□□ -0.64
Snrnp40Q6PE01 AC166992.1-201ENSMUST00000216356 565 ntBASIC11.08□□□□□ -0.64
Snrnp40Q6PE01 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.08□□□□□ -0.64
Snrnp40Q6PE01 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.08□□□□□ -0.64
Snrnp40Q6PE01 Gm1821-202ENSMUST00000227415 750 ntBASIC11.08□□□□□ -0.64
Snrnp40Q6PE01 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Snrnp40Q6PE01 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Snrnp40Q6PE01 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Snrnp40Q6PE01 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Snrnp40Q6PE01 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Snrnp40Q6PE01 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC11.08□□□□□ -0.64
Snrnp40Q6PE01 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC11.08□□□□□ -0.64
Snrnp40Q6PE01 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Snrnp40Q6PE01 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Snrnp40Q6PE01 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC11.08□□□□□ -0.64
Snrnp40Q6PE01 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Snrnp40Q6PE01 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Snrnp40Q6PE01 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Snrnp40Q6PE01 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Snrnp40Q6PE01 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms