Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smarcc2Q6PDG5 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC14.74□□□□□ -0.05
Smarcc2Q6PDG5 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smarcc2Q6PDG5 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smarcc2Q6PDG5 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smarcc2Q6PDG5 Gm37437-201ENSMUST00000194451 1937 ntBASIC14.74□□□□□ -0.05
Smarcc2Q6PDG5 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smarcc2Q6PDG5 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smarcc2Q6PDG5 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smarcc2Q6PDG5 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smarcc2Q6PDG5 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smarcc2Q6PDG5 CT009757.3-201ENSMUST00000223367 2320 ntBASIC14.74□□□□□ -0.05
Smarcc2Q6PDG5 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smarcc2Q6PDG5 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smarcc2Q6PDG5 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smarcc2Q6PDG5 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smarcc2Q6PDG5 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Smarcc2Q6PDG5 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC14.74□□□□□ -0.05
Smarcc2Q6PDG5 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Smarcc2Q6PDG5 Gm6222-202ENSMUST00000182143 629 ntBASIC14.74□□□□□ -0.05
Smarcc2Q6PDG5 Gm19309-201ENSMUST00000218295 205 ntBASIC14.74□□□□□ -0.05
Smarcc2Q6PDG5 Gm10371-202ENSMUST00000228010 1081 ntBASIC14.74□□□□□ -0.05
Smarcc2Q6PDG5 Gm9823-201ENSMUST00000051212 327 ntBASIC14.74□□□□□ -0.05
Smarcc2Q6PDG5 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smarcc2Q6PDG5 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Smarcc2Q6PDG5 Gm8399-201ENSMUST00000082300 1117 ntBASIC14.74□□□□□ -0.05
Smarcc2Q6PDG5 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smarcc2Q6PDG5 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smarcc2Q6PDG5 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC14.74□□□□□ -0.05
Smarcc2Q6PDG5 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smarcc2Q6PDG5 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
Smarcc2Q6PDG5 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smarcc2Q6PDG5 Gm5780-201ENSMUST00000217774 1834 ntBASIC14.73□□□□□ -0.05
Smarcc2Q6PDG5 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcc2Q6PDG5 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcc2Q6PDG5 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcc2Q6PDG5 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcc2Q6PDG5 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcc2Q6PDG5 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcc2Q6PDG5 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Smarcc2Q6PDG5 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcc2Q6PDG5 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcc2Q6PDG5 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC14.73□□□□□ -0.05
Smarcc2Q6PDG5 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC14.73□□□□□ -0.05
Smarcc2Q6PDG5 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcc2Q6PDG5 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Smarcc2Q6PDG5 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcc2Q6PDG5 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC14.73□□□□□ -0.05
Smarcc2Q6PDG5 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Smarcc2Q6PDG5 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC14.73□□□□□ -0.05
Smarcc2Q6PDG5 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcc2Q6PDG5 Gm6013-201ENSMUST00000212264 699 ntBASIC14.73□□□□□ -0.05
Smarcc2Q6PDG5 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC14.73□□□□□ -0.05
Smarcc2Q6PDG5 AC133598.1-201ENSMUST00000224327 660 ntBASIC14.73□□□□□ -0.05
Smarcc2Q6PDG5 AC165260.3-202ENSMUST00000224550 1031 ntBASIC14.73□□□□□ -0.05
Smarcc2Q6PDG5 n-R5s195-201ENSMUST00000082891 119 ntBASIC14.73□□□□□ -0.05
Smarcc2Q6PDG5 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC14.73□□□□□ -0.05
Smarcc2Q6PDG5 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcc2Q6PDG5 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcc2Q6PDG5 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcc2Q6PDG5 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
Smarcc2Q6PDG5 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Smarcc2Q6PDG5 Gm6992-201ENSMUST00000217973 1607 ntBASIC14.73□□□□□ -0.05
Smarcc2Q6PDG5 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC14.73□□□□□ -0.05
Smarcc2Q6PDG5 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcc2Q6PDG5 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Smarcc2Q6PDG5 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcc2Q6PDG5 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcc2Q6PDG5 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcc2Q6PDG5 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcc2Q6PDG5 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcc2Q6PDG5 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcc2Q6PDG5 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcc2Q6PDG5 Gm5940-201ENSMUST00000117582 1068 ntBASIC14.72□□□□□ -0.05
Smarcc2Q6PDG5 Gm11591-201ENSMUST00000120063 702 ntBASIC14.72□□□□□ -0.05
Smarcc2Q6PDG5 Gm12329-201ENSMUST00000120829 1007 ntBASIC14.72□□□□□ -0.05
Smarcc2Q6PDG5 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcc2Q6PDG5 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcc2Q6PDG5 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC14.72□□□□□ -0.05
Smarcc2Q6PDG5 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC14.72□□□□□ -0.05
Smarcc2Q6PDG5 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC14.72□□□□□ -0.05
Smarcc2Q6PDG5 Gm6007-201ENSMUST00000208170 823 ntBASIC14.72□□□□□ -0.05
Smarcc2Q6PDG5 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcc2Q6PDG5 CU024892.2-201ENSMUST00000224608 832 ntBASIC14.72□□□□□ -0.05
Smarcc2Q6PDG5 Gm7399-201ENSMUST00000032395 858 ntBASIC14.72□□□□□ -0.05
Smarcc2Q6PDG5 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcc2Q6PDG5 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Smarcc2Q6PDG5 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcc2Q6PDG5 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcc2Q6PDG5 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC14.72□□□□□ -0.05
Smarcc2Q6PDG5 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcc2Q6PDG5 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC14.72□□□□□ -0.05
Smarcc2Q6PDG5 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC14.72□□□□□ -0.05
Smarcc2Q6PDG5 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcc2Q6PDG5 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcc2Q6PDG5 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcc2Q6PDG5 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Smarcc2Q6PDG5 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcc2Q6PDG5 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
Smarcc2Q6PDG5 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms