Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
VclQ64727 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
VclQ64727 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
VclQ64727 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
VclQ64727 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
VclQ64727 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.46□□□□□ -0.42
VclQ64727 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC12.46□□□□□ -0.42
VclQ64727 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
VclQ64727 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
VclQ64727 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
VclQ64727 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.42
VclQ64727 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
VclQ64727 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
VclQ64727 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
VclQ64727 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
VclQ64727 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
VclQ64727 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
VclQ64727 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
VclQ64727 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
VclQ64727 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
VclQ64727 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
VclQ64727 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VclQ64727 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
VclQ64727 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
VclQ64727 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
VclQ64727 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VclQ64727 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VclQ64727 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VclQ64727 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VclQ64727 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VclQ64727 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
VclQ64727 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
VclQ64727 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.45□□□□□ -0.42
VclQ64727 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.45□□□□□ -0.42
VclQ64727 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VclQ64727 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
VclQ64727 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.45□□□□□ -0.42
VclQ64727 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
VclQ64727 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.45□□□□□ -0.42
VclQ64727 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
VclQ64727 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
VclQ64727 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
VclQ64727 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.45□□□□□ -0.42
VclQ64727 Gm45331-201ENSMUST00000209868 554 ntBASIC12.45□□□□□ -0.42
VclQ64727 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.45□□□□□ -0.42
VclQ64727 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
VclQ64727 Gm18935-201ENSMUST00000212692 664 ntBASIC12.45□□□□□ -0.42
VclQ64727 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.45□□□□□ -0.42
VclQ64727 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VclQ64727 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
VclQ64727 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
VclQ64727 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
VclQ64727 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
VclQ64727 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.45□□□□□ -0.42
VclQ64727 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.45□□□□□ -0.42
VclQ64727 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
VclQ64727 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
VclQ64727 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
VclQ64727 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VclQ64727 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VclQ64727 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
VclQ64727 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
VclQ64727 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VclQ64727 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VclQ64727 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VclQ64727 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
VclQ64727 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
VclQ64727 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
VclQ64727 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
VclQ64727 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VclQ64727 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.44□□□□□ -0.42
VclQ64727 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.44□□□□□ -0.42
VclQ64727 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.44□□□□□ -0.42
VclQ64727 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.44□□□□□ -0.42
VclQ64727 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.44□□□□□ -0.42
VclQ64727 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
VclQ64727 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
VclQ64727 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.44□□□□□ -0.42
VclQ64727 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.44□□□□□ -0.42
VclQ64727 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.44□□□□□ -0.42
VclQ64727 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.44□□□□□ -0.42
VclQ64727 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.44□□□□□ -0.42
VclQ64727 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
VclQ64727 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
VclQ64727 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
VclQ64727 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
VclQ64727 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
VclQ64727 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.44□□□□□ -0.42
VclQ64727 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
VclQ64727 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
VclQ64727 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VclQ64727 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
VclQ64727 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
VclQ64727 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.44□□□□□ -0.42
VclQ64727 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.44□□□□□ -0.42
VclQ64727 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VclQ64727 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
VclQ64727 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VclQ64727 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
VclQ64727 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms