Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SspnQ62147 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
SspnQ62147 AL645783.1-201ENSMUST00000221416 1832 ntBASIC10.61□□□□□ -0.71
SspnQ62147 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
SspnQ62147 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
SspnQ62147 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC10.61□□□□□ -0.71
SspnQ62147 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
SspnQ62147 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SspnQ62147 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
SspnQ62147 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SspnQ62147 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SspnQ62147 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC10.61□□□□□ -0.71
SspnQ62147 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
SspnQ62147 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC10.61□□□□□ -0.71
SspnQ62147 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SspnQ62147 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
SspnQ62147 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC10.61□□□□□ -0.71
SspnQ62147 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC10.61□□□□□ -0.71
SspnQ62147 Gm11618-201ENSMUST00000117946 267 ntBASIC10.61□□□□□ -0.71
SspnQ62147 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SspnQ62147 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC10.61□□□□□ -0.71
SspnQ62147 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
SspnQ62147 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC10.61□□□□□ -0.71
SspnQ62147 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SspnQ62147 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
SspnQ62147 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC10.61□□□□□ -0.71
SspnQ62147 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
SspnQ62147 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC10.61□□□□□ -0.71
SspnQ62147 Gm9908-201ENSMUST00000211534 448 ntBASIC10.61□□□□□ -0.71
SspnQ62147 AC162801.1-201ENSMUST00000220612 198 ntBASIC10.61□□□□□ -0.71
SspnQ62147 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
SspnQ62147 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SspnQ62147 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
SspnQ62147 Gm6180-201ENSMUST00000065243 498 ntBASIC10.61□□□□□ -0.71
SspnQ62147 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
SspnQ62147 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
SspnQ62147 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC10.61□□□□□ -0.71
SspnQ62147 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC10.61□□□□□ -0.71
SspnQ62147 Gm44094-201ENSMUST00000204703 2030 ntBASIC10.61□□□□□ -0.71
SspnQ62147 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC10.61□□□□□ -0.71
SspnQ62147 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
SspnQ62147 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC10.61□□□□□ -0.71
SspnQ62147 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SspnQ62147 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
SspnQ62147 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SspnQ62147 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC10.61□□□□□ -0.71
SspnQ62147 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC10.6□□□□□ -0.71
SspnQ62147 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
SspnQ62147 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SspnQ62147 Nudt18-202ENSMUST00000228554 3619 ntBASIC10.6□□□□□ -0.71
SspnQ62147 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SspnQ62147 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
SspnQ62147 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
SspnQ62147 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
SspnQ62147 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SspnQ62147 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SspnQ62147 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC10.6□□□□□ -0.71
SspnQ62147 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
SspnQ62147 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SspnQ62147 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC10.6□□□□□ -0.71
SspnQ62147 Gm44086-201ENSMUST00000203251 2349 ntBASIC10.6□□□□□ -0.71
SspnQ62147 Mir686-201ENSMUST00000102174 109 ntBASIC10.6□□□□□ -0.71
SspnQ62147 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
SspnQ62147 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
SspnQ62147 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
SspnQ62147 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
SspnQ62147 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
SspnQ62147 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
SspnQ62147 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
SspnQ62147 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SspnQ62147 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC10.6□□□□□ -0.71
SspnQ62147 Gm9061-201ENSMUST00000182707 1006 ntBASIC10.6□□□□□ -0.71
SspnQ62147 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
SspnQ62147 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC10.6□□□□□ -0.71
SspnQ62147 Gm8463-201ENSMUST00000208573 613 ntBASIC10.6□□□□□ -0.71
SspnQ62147 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
SspnQ62147 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SspnQ62147 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SspnQ62147 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SspnQ62147 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SspnQ62147 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
SspnQ62147 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
SspnQ62147 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
SspnQ62147 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
SspnQ62147 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SspnQ62147 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC10.6□□□□□ -0.71
SspnQ62147 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SspnQ62147 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SspnQ62147 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
SspnQ62147 Cuzd1-201ENSMUST00000046611 2256 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SspnQ62147 BC043934-202ENSMUST00000185694 2356 ntBASIC10.6□□□□□ -0.71
SspnQ62147 Gm38385-201ENSMUST00000194454 2351 ntBASIC10.6□□□□□ -0.71
SspnQ62147 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
SspnQ62147 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
SspnQ62147 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
SspnQ62147 Gm27196-201ENSMUST00000184787 2582 ntBASIC10.6□□□□□ -0.71
SspnQ62147 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC10.6□□□□□ -0.71
SspnQ62147 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
SspnQ62147 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
SspnQ62147 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms