Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcd1Q61466 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcd1Q61466 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcd1Q61466 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC13.15□□□□□ -0.3
Smarcd1Q61466 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Smarcd1Q61466 Gm23270-201ENSMUST00000104055 131 ntBASIC13.15□□□□□ -0.3
Smarcd1Q61466 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC13.15□□□□□ -0.3
Smarcd1Q61466 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Smarcd1Q61466 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Smarcd1Q61466 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC13.15□□□□□ -0.3
Smarcd1Q61466 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcd1Q61466 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcd1Q61466 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Smarcd1Q61466 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC13.15□□□□□ -0.3
Smarcd1Q61466 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcd1Q61466 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC13.15□□□□□ -0.3
Smarcd1Q61466 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC13.15□□□□□ -0.3
Smarcd1Q61466 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcd1Q61466 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcd1Q61466 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Smarcd1Q61466 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcd1Q61466 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcd1Q61466 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Smarcd1Q61466 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcd1Q61466 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcd1Q61466 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Smarcd1Q61466 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcd1Q61466 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcd1Q61466 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcd1Q61466 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Smarcd1Q61466 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcd1Q61466 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcd1Q61466 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Smarcd1Q61466 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcd1Q61466 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcd1Q61466 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.15□□□□□ -0.3
Smarcd1Q61466 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Smarcd1Q61466 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcd1Q61466 AC154262.2-202ENSMUST00000225158 1331 ntBASIC13.14□□□□□ -0.31
Smarcd1Q61466 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcd1Q61466 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.14□□□□□ -0.31
Smarcd1Q61466 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Smarcd1Q61466 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcd1Q61466 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.14□□□□□ -0.31
Smarcd1Q61466 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Smarcd1Q61466 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcd1Q61466 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcd1Q61466 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcd1Q61466 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcd1Q61466 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.14□□□□□ -0.31
Smarcd1Q61466 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcd1Q61466 Gm24231-201ENSMUST00000104315 133 ntBASIC13.14□□□□□ -0.31
Smarcd1Q61466 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
Smarcd1Q61466 Gm15547-201ENSMUST00000122152 333 ntBASIC13.14□□□□□ -0.31
Smarcd1Q61466 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcd1Q61466 Gm13570-201ENSMUST00000140763 309 ntBASIC13.14□□□□□ -0.31
Smarcd1Q61466 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcd1Q61466 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcd1Q61466 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcd1Q61466 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC13.14□□□□□ -0.31
Smarcd1Q61466 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.14□□□□□ -0.31
Smarcd1Q61466 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcd1Q61466 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcd1Q61466 Gm26035-201ENSMUST00000083065 308 ntBASIC13.14□□□□□ -0.31
Smarcd1Q61466 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Smarcd1Q61466 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcd1Q61466 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Smarcd1Q61466 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
Smarcd1Q61466 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcd1Q61466 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcd1Q61466 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcd1Q61466 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcd1Q61466 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcd1Q61466 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.13□□□□□ -0.31
Smarcd1Q61466 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcd1Q61466 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC13.13□□□□□ -0.31
Smarcd1Q61466 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcd1Q61466 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcd1Q61466 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcd1Q61466 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcd1Q61466 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcd1Q61466 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcd1Q61466 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcd1Q61466 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcd1Q61466 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.13□□□□□ -0.31
Smarcd1Q61466 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcd1Q61466 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcd1Q61466 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcd1Q61466 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcd1Q61466 Gm26083-201ENSMUST00000157904 193 ntBASIC13.13□□□□□ -0.31
Smarcd1Q61466 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC13.13□□□□□ -0.31
Smarcd1Q61466 Ighv1-62-201ENSMUST00000193406 350 ntBASIC13.13□□□□□ -0.31
Smarcd1Q61466 Gm9257-201ENSMUST00000221254 232 ntBASIC13.13□□□□□ -0.31
Smarcd1Q61466 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcd1Q61466 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcd1Q61466 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcd1Q61466 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Smarcd1Q61466 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcd1Q61466 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcd1Q61466 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms