Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Six4Q61321 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Six4Q61321 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.73□□□□□ -0.37
Six4Q61321 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Six4Q61321 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Six4Q61321 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Six4Q61321 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Six4Q61321 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Six4Q61321 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.73□□□□□ -0.37
Six4Q61321 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.73□□□□□ -0.37
Six4Q61321 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Six4Q61321 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.73□□□□□ -0.37
Six4Q61321 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Six4Q61321 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Six4Q61321 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Six4Q61321 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Six4Q61321 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Six4Q61321 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.72□□□□□ -0.37
Six4Q61321 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Six4Q61321 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Six4Q61321 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.72□□□□□ -0.37
Six4Q61321 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Six4Q61321 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.72□□□□□ -0.37
Six4Q61321 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Six4Q61321 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Six4Q61321 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Six4Q61321 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Six4Q61321 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.72□□□□□ -0.37
Six4Q61321 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Six4Q61321 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Six4Q61321 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Six4Q61321 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Six4Q61321 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Six4Q61321 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Six4Q61321 Gm15370-201ENSMUST00000117158 253 ntBASIC12.72□□□□□ -0.37
Six4Q61321 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.72□□□□□ -0.37
Six4Q61321 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.72□□□□□ -0.37
Six4Q61321 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Six4Q61321 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Six4Q61321 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.72□□□□□ -0.37
Six4Q61321 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.72□□□□□ -0.37
Six4Q61321 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.72□□□□□ -0.37
Six4Q61321 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.72□□□□□ -0.37
Six4Q61321 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Six4Q61321 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.72□□□□□ -0.37
Six4Q61321 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Six4Q61321 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Six4Q61321 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Six4Q61321 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Six4Q61321 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Six4Q61321 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Six4Q61321 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.72□□□□□ -0.37
Six4Q61321 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Six4Q61321 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Six4Q61321 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.72□□□□□ -0.37
Six4Q61321 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Six4Q61321 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Six4Q61321 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Six4Q61321 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Six4Q61321 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.72□□□□□ -0.37
Six4Q61321 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Six4Q61321 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Six4Q61321 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Six4Q61321 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Six4Q61321 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.71□□□□□ -0.37
Six4Q61321 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Six4Q61321 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.71□□□□□ -0.37
Six4Q61321 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Six4Q61321 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Six4Q61321 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Six4Q61321 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.71□□□□□ -0.37
Six4Q61321 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Six4Q61321 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Six4Q61321 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Six4Q61321 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.71□□□□□ -0.37
Six4Q61321 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Six4Q61321 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Six4Q61321 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Six4Q61321 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Six4Q61321 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Six4Q61321 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Six4Q61321 Gm4986-201ENSMUST00000119731 549 ntBASIC12.71□□□□□ -0.37
Six4Q61321 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.71□□□□□ -0.37
Six4Q61321 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Six4Q61321 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Six4Q61321 Gm2546-201ENSMUST00000182630 991 ntBASIC12.71□□□□□ -0.37
Six4Q61321 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.71□□□□□ -0.37
Six4Q61321 Gm27243-201ENSMUST00000183964 521 ntBASIC12.71□□□□□ -0.37
Six4Q61321 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Six4Q61321 Gm18935-201ENSMUST00000212692 664 ntBASIC12.71□□□□□ -0.37
Six4Q61321 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.71□□□□□ -0.37
Six4Q61321 Morn2-202ENSMUST00000227729 656 ntBASIC12.71□□□□□ -0.37
Six4Q61321 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Six4Q61321 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Six4Q61321 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Six4Q61321 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Six4Q61321 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Six4Q61321 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Six4Q61321 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Six4Q61321 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms