Protein–RNA interactions for Protein: Q60611

Satb1, DNA-binding protein SATB1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Satb1Q60611 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Satb1Q60611 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Satb1Q60611 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC13.16□□□□□ -0.3
Satb1Q60611 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Satb1Q60611 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Satb1Q60611 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Satb1Q60611 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Satb1Q60611 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Satb1Q60611 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.16□□□□□ -0.3
Satb1Q60611 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Satb1Q60611 Gm43721-201ENSMUST00000199677 2313 ntBASIC13.16□□□□□ -0.3
Satb1Q60611 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Satb1Q60611 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Satb1Q60611 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Satb1Q60611 Gm13047-201ENSMUST00000117116 815 ntBASIC13.16□□□□□ -0.3
Satb1Q60611 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.16□□□□□ -0.3
Satb1Q60611 Gm11637-201ENSMUST00000120601 592 ntBASIC13.16□□□□□ -0.3
Satb1Q60611 Gm12363-201ENSMUST00000122250 668 ntBASIC13.16□□□□□ -0.3
Satb1Q60611 Gm44136-201ENSMUST00000203819 1106 ntBASIC13.16□□□□□ -0.3
Satb1Q60611 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC13.16□□□□□ -0.3
Satb1Q60611 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC13.16□□□□□ -0.3
Satb1Q60611 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Satb1Q60611 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Satb1Q60611 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Satb1Q60611 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Satb1Q60611 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Satb1Q60611 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Satb1Q60611 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Satb1Q60611 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Satb1Q60611 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Satb1Q60611 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
Satb1Q60611 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Satb1Q60611 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Satb1Q60611 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Satb1Q60611 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Satb1Q60611 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Satb1Q60611 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Satb1Q60611 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Satb1Q60611 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.15□□□□□ -0.3
Satb1Q60611 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.15□□□□□ -0.3
Satb1Q60611 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Satb1Q60611 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Satb1Q60611 Gm45743-201ENSMUST00000212701 2795 ntBASIC13.15□□□□□ -0.3
Satb1Q60611 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Satb1Q60611 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Satb1Q60611 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Satb1Q60611 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Satb1Q60611 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.15□□□□□ -0.3
Satb1Q60611 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Satb1Q60611 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Satb1Q60611 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Satb1Q60611 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Satb1Q60611 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Satb1Q60611 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Satb1Q60611 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Satb1Q60611 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Satb1Q60611 Gm11930-201ENSMUST00000117788 190 ntBASIC13.15□□□□□ -0.3
Satb1Q60611 Gm4760-201ENSMUST00000119663 1030 ntBASIC13.15□□□□□ -0.3
Satb1Q60611 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Satb1Q60611 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC13.15□□□□□ -0.3
Satb1Q60611 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Satb1Q60611 Gm19459-201ENSMUST00000176240 835 ntBASIC13.15□□□□□ -0.3
Satb1Q60611 Gm27046-201ENSMUST00000182160 463 ntBASIC13.15□□□□□ -0.3
Satb1Q60611 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC13.15□□□□□ -0.3
Satb1Q60611 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Satb1Q60611 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Satb1Q60611 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Satb1Q60611 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Satb1Q60611 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Satb1Q60611 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Satb1Q60611 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Satb1Q60611 Gm15897-201ENSMUST00000117770 1486 ntBASIC13.15□□□□□ -0.3
Satb1Q60611 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Satb1Q60611 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Satb1Q60611 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Satb1Q60611 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Satb1Q60611 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Satb1Q60611 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Satb1Q60611 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Satb1Q60611 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Satb1Q60611 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Satb1Q60611 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Satb1Q60611 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Satb1Q60611 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Satb1Q60611 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Satb1Q60611 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Satb1Q60611 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Satb1Q60611 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Satb1Q60611 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Satb1Q60611 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.14□□□□□ -0.31
Satb1Q60611 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Satb1Q60611 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Satb1Q60611 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Satb1Q60611 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Satb1Q60611 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Satb1Q60611 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC13.14□□□□□ -0.31
Satb1Q60611 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Satb1Q60611 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
Satb1Q60611 Gm12403-201ENSMUST00000121384 959 ntBASIC13.14□□□□□ -0.31
Satb1Q60611 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms