Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Xrcc1Q60596 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Xrcc1Q60596 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Xrcc1Q60596 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Xrcc1Q60596 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Xrcc1Q60596 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Xrcc1Q60596 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.09□□□□□ -0.47
Xrcc1Q60596 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Xrcc1Q60596 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Xrcc1Q60596 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Xrcc1Q60596 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.09□□□□□ -0.47
Xrcc1Q60596 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Xrcc1Q60596 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Xrcc1Q60596 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Xrcc1Q60596 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12.09□□□□□ -0.47
Xrcc1Q60596 Gm45331-201ENSMUST00000209868 554 ntBASIC12.09□□□□□ -0.47
Xrcc1Q60596 Gm18935-201ENSMUST00000212692 664 ntBASIC12.09□□□□□ -0.47
Xrcc1Q60596 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Xrcc1Q60596 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.09□□□□□ -0.47
Xrcc1Q60596 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.09□□□□□ -0.47
Xrcc1Q60596 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.09□□□□□ -0.47
Xrcc1Q60596 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Xrcc1Q60596 Gm8227-201ENSMUST00000223306 571 ntBASIC12.09□□□□□ -0.47
Xrcc1Q60596 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.09□□□□□ -0.47
Xrcc1Q60596 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.09□□□□□ -0.47
Xrcc1Q60596 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Xrcc1Q60596 Gm22058-201ENSMUST00000083393 310 ntBASIC12.09□□□□□ -0.47
Xrcc1Q60596 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Xrcc1Q60596 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Xrcc1Q60596 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.09□□□□□ -0.47
Xrcc1Q60596 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.09□□□□□ -0.47
Xrcc1Q60596 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Xrcc1Q60596 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Xrcc1Q60596 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Xrcc1Q60596 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.09□□□□□ -0.47
Xrcc1Q60596 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Xrcc1Q60596 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Xrcc1Q60596 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.09□□□□□ -0.47
Xrcc1Q60596 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Xrcc1Q60596 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Xrcc1Q60596 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Xrcc1Q60596 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Xrcc1Q60596 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Xrcc1Q60596 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.09□□□□□ -0.47
Xrcc1Q60596 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Xrcc1Q60596 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.09□□□□□ -0.47
Xrcc1Q60596 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Xrcc1Q60596 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.09□□□□□ -0.47
Xrcc1Q60596 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Xrcc1Q60596 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Xrcc1Q60596 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Xrcc1Q60596 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Xrcc1Q60596 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Xrcc1Q60596 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Xrcc1Q60596 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Xrcc1Q60596 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.08□□□□□ -0.47
Xrcc1Q60596 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Xrcc1Q60596 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Xrcc1Q60596 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Xrcc1Q60596 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Xrcc1Q60596 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Xrcc1Q60596 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Xrcc1Q60596 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Xrcc1Q60596 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Xrcc1Q60596 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Xrcc1Q60596 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Xrcc1Q60596 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Xrcc1Q60596 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Xrcc1Q60596 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.08□□□□□ -0.48
Xrcc1Q60596 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Xrcc1Q60596 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Xrcc1Q60596 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.08□□□□□ -0.48
Xrcc1Q60596 Gm13297-201ENSMUST00000120205 934 ntBASIC12.08□□□□□ -0.48
Xrcc1Q60596 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.08□□□□□ -0.48
Xrcc1Q60596 Gm27516-201ENSMUST00000184237 98 ntBASIC12.08□□□□□ -0.48
Xrcc1Q60596 Gm29396-201ENSMUST00000185659 716 ntBASIC12.08□□□□□ -0.48
Xrcc1Q60596 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.08□□□□□ -0.48
Xrcc1Q60596 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.08□□□□□ -0.48
Xrcc1Q60596 Gm7046-201ENSMUST00000221351 977 ntBASIC12.08□□□□□ -0.48
Xrcc1Q60596 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Xrcc1Q60596 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Xrcc1Q60596 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Xrcc1Q60596 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Xrcc1Q60596 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.08□□□□□ -0.48
Xrcc1Q60596 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Xrcc1Q60596 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Xrcc1Q60596 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Xrcc1Q60596 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Xrcc1Q60596 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.08□□□□□ -0.48
Xrcc1Q60596 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Xrcc1Q60596 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Xrcc1Q60596 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Xrcc1Q60596 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Xrcc1Q60596 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.08□□□□□ -0.48
Xrcc1Q60596 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Xrcc1Q60596 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Xrcc1Q60596 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Xrcc1Q60596 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.07□□□□□ -0.48
Xrcc1Q60596 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.07□□□□□ -0.48
Xrcc1Q60596 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms