Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Vps54Q5SPW0 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps54Q5SPW0 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps54Q5SPW0 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps54Q5SPW0 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps54Q5SPW0 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC15.14■□□□□ 0.01
Vps54Q5SPW0 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
Vps54Q5SPW0 Gm23270-201ENSMUST00000104055 131 ntBASIC15.14■□□□□ 0.01
Vps54Q5SPW0 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC15.14■□□□□ 0.01
Vps54Q5SPW0 Gm11222-201ENSMUST00000119005 738 ntBASIC15.14■□□□□ 0.01
Vps54Q5SPW0 Gm14999-201ENSMUST00000121039 624 ntBASIC15.14■□□□□ 0.01
Vps54Q5SPW0 Gm14760-201ENSMUST00000121831 999 ntBASIC15.14■□□□□ 0.01
Vps54Q5SPW0 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Vps54Q5SPW0 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC15.14■□□□□ 0.01
Vps54Q5SPW0 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps54Q5SPW0 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps54Q5SPW0 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Vps54Q5SPW0 Gm26956-201ENSMUST00000182176 986 ntBASIC15.14■□□□□ 0.01
Vps54Q5SPW0 Gm9022-201ENSMUST00000182482 992 ntBASIC15.14■□□□□ 0.01
Vps54Q5SPW0 Ighv1-62-201ENSMUST00000193406 350 ntBASIC15.14■□□□□ 0.01
Vps54Q5SPW0 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Vps54Q5SPW0 Gm26035-201ENSMUST00000083065 308 ntBASIC15.14■□□□□ 0.01
Vps54Q5SPW0 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps54Q5SPW0 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps54Q5SPW0 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps54Q5SPW0 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps54Q5SPW0 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Vps54Q5SPW0 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps54Q5SPW0 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps54Q5SPW0 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
Vps54Q5SPW0 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
Vps54Q5SPW0 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps54Q5SPW0 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps54Q5SPW0 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps54Q5SPW0 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC15.14■□□□□ 0.01
Vps54Q5SPW0 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps54Q5SPW0 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC15.14■□□□□ 0.01
Vps54Q5SPW0 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps54Q5SPW0 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Vps54Q5SPW0 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC15.14■□□□□ 0.01
Vps54Q5SPW0 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps54Q5SPW0 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps54Q5SPW0 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps54Q5SPW0 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps54Q5SPW0 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps54Q5SPW0 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Vps54Q5SPW0 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps54Q5SPW0 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps54Q5SPW0 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Vps54Q5SPW0 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC15.13■□□□□ 0.01
Vps54Q5SPW0 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps54Q5SPW0 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps54Q5SPW0 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps54Q5SPW0 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC15.13■□□□□ 0.01
Vps54Q5SPW0 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps54Q5SPW0 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC15.13■□□□□ 0.01
Vps54Q5SPW0 Gm43721-201ENSMUST00000199677 2313 ntBASIC15.13■□□□□ 0.01
Vps54Q5SPW0 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Vps54Q5SPW0 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps54Q5SPW0 AC123834.1-201ENSMUST00000225346 2043 ntBASIC15.13■□□□□ 0.01
Vps54Q5SPW0 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps54Q5SPW0 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps54Q5SPW0 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps54Q5SPW0 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps54Q5SPW0 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Vps54Q5SPW0 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps54Q5SPW0 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
Vps54Q5SPW0 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps54Q5SPW0 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps54Q5SPW0 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps54Q5SPW0 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps54Q5SPW0 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Vps54Q5SPW0 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Vps54Q5SPW0 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Vps54Q5SPW0 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps54Q5SPW0 Ntrk2-208ENSMUST00000225583 2719 ntBASIC15.13■□□□□ 0.01
Vps54Q5SPW0 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC15.13■□□□□ 0.01
Vps54Q5SPW0 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps54Q5SPW0 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Vps54Q5SPW0 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps54Q5SPW0 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Vps54Q5SPW0 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC15.13■□□□□ 0.01
Vps54Q5SPW0 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
Vps54Q5SPW0 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps54Q5SPW0 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Vps54Q5SPW0 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps54Q5SPW0 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps54Q5SPW0 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Vps54Q5SPW0 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Vps54Q5SPW0 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps54Q5SPW0 AC121805.2-201ENSMUST00000218808 2538 ntBASIC15.12■□□□□ 0.01
Vps54Q5SPW0 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps54Q5SPW0 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps54Q5SPW0 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps54Q5SPW0 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Vps54Q5SPW0 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps54Q5SPW0 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Vps54Q5SPW0 Gm12314-201ENSMUST00000118104 538 ntBASIC15.12■□□□□ 0.01
Vps54Q5SPW0 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Vps54Q5SPW0 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms