Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scn2bQ56A07 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
Scn2bQ56A07 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn2bQ56A07 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn2bQ56A07 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.49□□□□□ -0.41
Scn2bQ56A07 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Scn2bQ56A07 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Scn2bQ56A07 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn2bQ56A07 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Scn2bQ56A07 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn2bQ56A07 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Scn2bQ56A07 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn2bQ56A07 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn2bQ56A07 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn2bQ56A07 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Scn2bQ56A07 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn2bQ56A07 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn2bQ56A07 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn2bQ56A07 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn2bQ56A07 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Scn2bQ56A07 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn2bQ56A07 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn2bQ56A07 Gm14127-201ENSMUST00000117906 678 ntBASIC12.49□□□□□ -0.41
Scn2bQ56A07 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Scn2bQ56A07 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn2bQ56A07 Proscos-202ENSMUST00000178990 666 ntBASIC12.49□□□□□ -0.41
Scn2bQ56A07 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Scn2bQ56A07 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.49□□□□□ -0.41
Scn2bQ56A07 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Scn2bQ56A07 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.49□□□□□ -0.41
Scn2bQ56A07 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Scn2bQ56A07 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn2bQ56A07 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Scn2bQ56A07 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Scn2bQ56A07 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Scn2bQ56A07 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
Scn2bQ56A07 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Scn2bQ56A07 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Scn2bQ56A07 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn2bQ56A07 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn2bQ56A07 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn2bQ56A07 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn2bQ56A07 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn2bQ56A07 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Scn2bQ56A07 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn2bQ56A07 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.48□□□□□ -0.41
Scn2bQ56A07 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn2bQ56A07 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn2bQ56A07 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn2bQ56A07 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn2bQ56A07 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn2bQ56A07 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn2bQ56A07 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Scn2bQ56A07 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn2bQ56A07 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.48□□□□□ -0.41
Scn2bQ56A07 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Scn2bQ56A07 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn2bQ56A07 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Scn2bQ56A07 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Scn2bQ56A07 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.48□□□□□ -0.41
Scn2bQ56A07 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn2bQ56A07 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.48□□□□□ -0.41
Scn2bQ56A07 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Scn2bQ56A07 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.48□□□□□ -0.41
Scn2bQ56A07 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Scn2bQ56A07 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Scn2bQ56A07 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Scn2bQ56A07 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn2bQ56A07 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn2bQ56A07 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Scn2bQ56A07 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Scn2bQ56A07 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Scn2bQ56A07 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.48□□□□□ -0.41
Scn2bQ56A07 Gm29649-201ENSMUST00000185649 419 ntBASIC12.48□□□□□ -0.41
Scn2bQ56A07 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.48□□□□□ -0.41
Scn2bQ56A07 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.48□□□□□ -0.41
Scn2bQ56A07 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Scn2bQ56A07 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC12.48□□□□□ -0.41
Scn2bQ56A07 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn2bQ56A07 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn2bQ56A07 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn2bQ56A07 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn2bQ56A07 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn2bQ56A07 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn2bQ56A07 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn2bQ56A07 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn2bQ56A07 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Scn2bQ56A07 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn2bQ56A07 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Scn2bQ56A07 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn2bQ56A07 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn2bQ56A07 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Scn2bQ56A07 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Scn2bQ56A07 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn2bQ56A07 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn2bQ56A07 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn2bQ56A07 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.47□□□□□ -0.41
Scn2bQ56A07 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
Scn2bQ56A07 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.47□□□□□ -0.41
Scn2bQ56A07 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms