Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Gm15207-201ENSMUST00000119259 442 ntBASIC15.32■□□□□ 0.04
Shank3Q4ACU6 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Shank3Q4ACU6 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC15.32■□□□□ 0.04
Shank3Q4ACU6 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC15.32■□□□□ 0.04
Shank3Q4ACU6 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Shank3Q4ACU6 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Shank3Q4ACU6 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Shank3Q4ACU6 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC15.32■□□□□ 0.04
Shank3Q4ACU6 CT025553.1-201ENSMUST00000226292 299 ntBASIC15.32■□□□□ 0.04
Shank3Q4ACU6 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Shank3Q4ACU6 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Shank3Q4ACU6 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Shank3Q4ACU6 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Shank3Q4ACU6 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Shank3Q4ACU6 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Shank3Q4ACU6 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Shank3Q4ACU6 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Shank3Q4ACU6 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
Shank3Q4ACU6 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Shank3Q4ACU6 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Shank3Q4ACU6 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Shank3Q4ACU6 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC15.32■□□□□ 0.04
Shank3Q4ACU6 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Shank3Q4ACU6 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Shank3Q4ACU6 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Shank3Q4ACU6 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Shank3Q4ACU6 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Shank3Q4ACU6 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Shank3Q4ACU6 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shank3Q4ACU6 Gm4034-201ENSMUST00000187674 480 ntBASIC15.31■□□□□ 0.04
Shank3Q4ACU6 Gm9645-201ENSMUST00000197131 792 ntBASIC15.31■□□□□ 0.04
Shank3Q4ACU6 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC15.31■□□□□ 0.04
Shank3Q4ACU6 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shank3Q4ACU6 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Shank3Q4ACU6 Grk6-205ENSMUST00000224653 2976 ntBASIC15.31■□□□□ 0.04
Shank3Q4ACU6 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shank3Q4ACU6 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shank3Q4ACU6 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shank3Q4ACU6 Gm44065-201ENSMUST00000203184 3527 ntBASIC15.31■□□□□ 0.04
Shank3Q4ACU6 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shank3Q4ACU6 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Shank3Q4ACU6 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Shank3Q4ACU6 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shank3Q4ACU6 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Shank3Q4ACU6 Matn2-206ENSMUST00000228570 2798 ntBASIC15.31■□□□□ 0.04
Shank3Q4ACU6 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shank3Q4ACU6 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shank3Q4ACU6 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shank3Q4ACU6 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Shank3Q4ACU6 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Shank3Q4ACU6 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC15.31■□□□□ 0.04
Shank3Q4ACU6 Gm15004-201ENSMUST00000119192 630 ntBASIC15.31■□□□□ 0.04
Shank3Q4ACU6 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Shank3Q4ACU6 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC15.31■□□□□ 0.04
Shank3Q4ACU6 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shank3Q4ACU6 Gm29410-201ENSMUST00000188383 694 ntBASIC15.31■□□□□ 0.04
Shank3Q4ACU6 Gm18041-201ENSMUST00000218210 618 ntBASIC15.31■□□□□ 0.04
Shank3Q4ACU6 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC15.31■□□□□ 0.04
Shank3Q4ACU6 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Shank3Q4ACU6 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shank3Q4ACU6 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Shank3Q4ACU6 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shank3Q4ACU6 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shank3Q4ACU6 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Shank3Q4ACU6 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Shank3Q4ACU6 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Shank3Q4ACU6 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Shank3Q4ACU6 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shank3Q4ACU6 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shank3Q4ACU6 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shank3Q4ACU6 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shank3Q4ACU6 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shank3Q4ACU6 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shank3Q4ACU6 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shank3Q4ACU6 Gm14193-201ENSMUST00000105067 153 ntBASIC15.3■□□□□ 0.04
Shank3Q4ACU6 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shank3Q4ACU6 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC15.3■□□□□ 0.04
Shank3Q4ACU6 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC15.3■□□□□ 0.04
Shank3Q4ACU6 Gm5706-201ENSMUST00000181525 993 ntBASIC15.3■□□□□ 0.04
Shank3Q4ACU6 Gm8531-201ENSMUST00000188319 893 ntBASIC15.3■□□□□ 0.04
Shank3Q4ACU6 Gm3017-201ENSMUST00000203603 1126 ntBASIC15.3■□□□□ 0.04
Shank3Q4ACU6 Gm44421-201ENSMUST00000205064 1221 ntBASIC15.3■□□□□ 0.04
Shank3Q4ACU6 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC15.3■□□□□ 0.04
Shank3Q4ACU6 Gm45113-201ENSMUST00000207518 165 ntBASIC15.3■□□□□ 0.04
Shank3Q4ACU6 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC15.3■□□□□ 0.04
Shank3Q4ACU6 AC124433.1-201ENSMUST00000224483 1063 ntBASIC15.3■□□□□ 0.04
Shank3Q4ACU6 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Shank3Q4ACU6 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Shank3Q4ACU6 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shank3Q4ACU6 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shank3Q4ACU6 AC126262.1-201ENSMUST00000221802 1904 ntBASIC15.3■□□□□ 0.04
Shank3Q4ACU6 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Shank3Q4ACU6 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shank3Q4ACU6 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shank3Q4ACU6 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC15.3■□□□□ 0.04
Shank3Q4ACU6 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shank3Q4ACU6 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shank3Q4ACU6 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shank3Q4ACU6 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Shank3Q4ACU6 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms