Protein–RNA interactions for Protein: Q3USH5

Sfswap, Splicing factor, suppressor of white-apricot homolog, mousemouse

Known RBP Predictions only

Length 945 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SfswapQ3USH5 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
SfswapQ3USH5 Gm9947-201ENSMUST00000067599 2920 ntBASIC15.06■□□□□ 0
SfswapQ3USH5 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
SfswapQ3USH5 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
SfswapQ3USH5 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC15.06■□□□□ 0
SfswapQ3USH5 Gm13315-201ENSMUST00000120376 991 ntBASIC15.06■□□□□ 0
SfswapQ3USH5 Gm5863-201ENSMUST00000121760 1008 ntBASIC15.06■□□□□ 0
SfswapQ3USH5 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC15.06■□□□□ 0
SfswapQ3USH5 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC15.06■□□□□ 0
SfswapQ3USH5 Gm16570-201ENSMUST00000161951 436 ntBASIC15.06■□□□□ 0
SfswapQ3USH5 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC15.06■□□□□ 0
SfswapQ3USH5 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
SfswapQ3USH5 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC15.06■□□□□ 0
SfswapQ3USH5 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
SfswapQ3USH5 Gm45186-201ENSMUST00000206874 478 ntBASIC15.06■□□□□ 0
SfswapQ3USH5 Mettl6-204ENSMUST00000227595 1027 ntBASIC15.06■□□□□ 0
SfswapQ3USH5 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SfswapQ3USH5 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
SfswapQ3USH5 Crry-ps-201ENSMUST00000079090 1309 ntBASIC15.06■□□□□ 0
SfswapQ3USH5 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC15.06■□□□□ 0
SfswapQ3USH5 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC15.06■□□□□ 0
SfswapQ3USH5 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SfswapQ3USH5 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SfswapQ3USH5 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC15.06■□□□□ 0
SfswapQ3USH5 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC15.06■□□□□ 0
SfswapQ3USH5 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
SfswapQ3USH5 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
SfswapQ3USH5 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
SfswapQ3USH5 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ 0
SfswapQ3USH5 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC15.05■□□□□ 0
SfswapQ3USH5 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
SfswapQ3USH5 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SfswapQ3USH5 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC15.05■□□□□ 0
SfswapQ3USH5 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
SfswapQ3USH5 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SfswapQ3USH5 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC15.05■□□□□ 0
SfswapQ3USH5 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC15.05■□□□□ 0
SfswapQ3USH5 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
SfswapQ3USH5 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC15.05■□□□□ -0
SfswapQ3USH5 Gm13570-201ENSMUST00000140763 309 ntBASIC15.05■□□□□ -0
SfswapQ3USH5 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC15.05■□□□□ -0
SfswapQ3USH5 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC15.05■□□□□ -0
SfswapQ3USH5 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC15.05■□□□□ -0
SfswapQ3USH5 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SfswapQ3USH5 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC15.05■□□□□ -0
SfswapQ3USH5 Gm39404-201ENSMUST00000216350 313 ntBASIC15.05■□□□□ -0
SfswapQ3USH5 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC15.05■□□□□ -0
SfswapQ3USH5 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC15.05■□□□□ -0
SfswapQ3USH5 AC138604.1-201ENSMUST00000226969 739 ntBASIC15.05■□□□□ -0
SfswapQ3USH5 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SfswapQ3USH5 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SfswapQ3USH5 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SfswapQ3USH5 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
SfswapQ3USH5 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC15.05■□□□□ -0
SfswapQ3USH5 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SfswapQ3USH5 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC15.05■□□□□ -0
SfswapQ3USH5 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SfswapQ3USH5 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
SfswapQ3USH5 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
SfswapQ3USH5 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SfswapQ3USH5 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SfswapQ3USH5 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SfswapQ3USH5 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
SfswapQ3USH5 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC15.04■□□□□ -0
SfswapQ3USH5 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC15.04■□□□□ -0
SfswapQ3USH5 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SfswapQ3USH5 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
SfswapQ3USH5 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC15.04■□□□□ -0
SfswapQ3USH5 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
SfswapQ3USH5 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SfswapQ3USH5 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
SfswapQ3USH5 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SfswapQ3USH5 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
SfswapQ3USH5 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SfswapQ3USH5 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC15.04■□□□□ -0
SfswapQ3USH5 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC15.04■□□□□ -0
SfswapQ3USH5 Gm5638-201ENSMUST00000118618 1258 ntBASIC15.04■□□□□ -0
SfswapQ3USH5 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SfswapQ3USH5 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC15.04■□□□□ -0
SfswapQ3USH5 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC15.04■□□□□ -0
SfswapQ3USH5 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC15.04■□□□□ -0
SfswapQ3USH5 Gm25700-201ENSMUST00000177693 110 ntBASIC15.04■□□□□ -0
SfswapQ3USH5 Gm5363-201ENSMUST00000211927 938 ntBASIC15.04■□□□□ -0
SfswapQ3USH5 AC125209.1-201ENSMUST00000225812 766 ntBASIC15.04■□□□□ -0
SfswapQ3USH5 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SfswapQ3USH5 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
SfswapQ3USH5 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC15.04■□□□□ -0
SfswapQ3USH5 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SfswapQ3USH5 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
SfswapQ3USH5 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
SfswapQ3USH5 Gm5939-201ENSMUST00000119613 2874 ntBASIC15.04■□□□□ -0
SfswapQ3USH5 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
SfswapQ3USH5 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SfswapQ3USH5 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SfswapQ3USH5 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
SfswapQ3USH5 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SfswapQ3USH5 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
SfswapQ3USH5 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SfswapQ3USH5 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
SfswapQ3USH5 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms