Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nlrc4Q3UP24 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nlrc4Q3UP24 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nlrc4Q3UP24 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nlrc4Q3UP24 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nlrc4Q3UP24 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nlrc4Q3UP24 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nlrc4Q3UP24 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Nlrc4Q3UP24 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nlrc4Q3UP24 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC13.31□□□□□ -0.28
Nlrc4Q3UP24 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nlrc4Q3UP24 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nlrc4Q3UP24 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nlrc4Q3UP24 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC13.31□□□□□ -0.28
Nlrc4Q3UP24 Gm4986-201ENSMUST00000119731 549 ntBASIC13.31□□□□□ -0.28
Nlrc4Q3UP24 Gm13315-201ENSMUST00000120376 991 ntBASIC13.31□□□□□ -0.28
Nlrc4Q3UP24 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nlrc4Q3UP24 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC13.31□□□□□ -0.28
Nlrc4Q3UP24 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC13.31□□□□□ -0.28
Nlrc4Q3UP24 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Nlrc4Q3UP24 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC13.31□□□□□ -0.28
Nlrc4Q3UP24 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC13.31□□□□□ -0.28
Nlrc4Q3UP24 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC13.31□□□□□ -0.28
Nlrc4Q3UP24 Gm6334-201ENSMUST00000207083 228 ntBASIC13.31□□□□□ -0.28
Nlrc4Q3UP24 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nlrc4Q3UP24 AC132384.14-201ENSMUST00000219346 1147 ntBASIC13.31□□□□□ -0.28
Nlrc4Q3UP24 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Nlrc4Q3UP24 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC13.31□□□□□ -0.28
Nlrc4Q3UP24 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nlrc4Q3UP24 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nlrc4Q3UP24 Gm4366-201ENSMUST00000201488 1342 ntBASIC13.31□□□□□ -0.28
Nlrc4Q3UP24 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nlrc4Q3UP24 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nlrc4Q3UP24 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.31□□□□□ -0.28
Nlrc4Q3UP24 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nlrc4Q3UP24 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nlrc4Q3UP24 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nlrc4Q3UP24 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Nlrc4Q3UP24 AC123834.1-201ENSMUST00000225346 2043 ntBASIC13.3□□□□□ -0.28
Nlrc4Q3UP24 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.3□□□□□ -0.28
Nlrc4Q3UP24 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nlrc4Q3UP24 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Nlrc4Q3UP24 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nlrc4Q3UP24 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nlrc4Q3UP24 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nlrc4Q3UP24 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nlrc4Q3UP24 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nlrc4Q3UP24 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nlrc4Q3UP24 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nlrc4Q3UP24 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.3□□□□□ -0.28
Nlrc4Q3UP24 Gm10434-201ENSMUST00000101158 471 ntBASIC13.3□□□□□ -0.28
Nlrc4Q3UP24 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nlrc4Q3UP24 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nlrc4Q3UP24 Gm8908-201ENSMUST00000121633 1024 ntBASIC13.3□□□□□ -0.28
Nlrc4Q3UP24 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nlrc4Q3UP24 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nlrc4Q3UP24 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC13.3□□□□□ -0.28
Nlrc4Q3UP24 Gm8176-201ENSMUST00000191297 1099 ntBASIC13.3□□□□□ -0.28
Nlrc4Q3UP24 Gm37489-201ENSMUST00000191883 159 ntBASIC13.3□□□□□ -0.28
Nlrc4Q3UP24 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nlrc4Q3UP24 Gm10371-202ENSMUST00000228010 1081 ntBASIC13.3□□□□□ -0.28
Nlrc4Q3UP24 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nlrc4Q3UP24 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nlrc4Q3UP24 Gm26035-201ENSMUST00000083065 308 ntBASIC13.3□□□□□ -0.28
Nlrc4Q3UP24 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC13.3□□□□□ -0.28
Nlrc4Q3UP24 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Nlrc4Q3UP24 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nlrc4Q3UP24 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nlrc4Q3UP24 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nlrc4Q3UP24 Gm37737-201ENSMUST00000195013 1638 ntBASIC13.3□□□□□ -0.28
Nlrc4Q3UP24 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nlrc4Q3UP24 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC13.3□□□□□ -0.28
Nlrc4Q3UP24 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nlrc4Q3UP24 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Nlrc4Q3UP24 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nlrc4Q3UP24 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Nlrc4Q3UP24 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC13.3□□□□□ -0.28
Nlrc4Q3UP24 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC13.3□□□□□ -0.28
Nlrc4Q3UP24 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nlrc4Q3UP24 Retreg1-206ENSMUST00000228306 1430 ntBASIC13.3□□□□□ -0.28
Nlrc4Q3UP24 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nlrc4Q3UP24 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nlrc4Q3UP24 Gm19221-201ENSMUST00000221827 1477 ntBASIC13.29□□□□□ -0.28
Nlrc4Q3UP24 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nlrc4Q3UP24 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nlrc4Q3UP24 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nlrc4Q3UP24 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nlrc4Q3UP24 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nlrc4Q3UP24 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nlrc4Q3UP24 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Nlrc4Q3UP24 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nlrc4Q3UP24 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nlrc4Q3UP24 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nlrc4Q3UP24 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nlrc4Q3UP24 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nlrc4Q3UP24 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
Nlrc4Q3UP24 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Nlrc4Q3UP24 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nlrc4Q3UP24 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nlrc4Q3UP24 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms