Protein–RNA interactions for Protein: Q3U2A8

Vars2, Valine--tRNA ligase, mitochondrial, mousemouse

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vars2Q3U2A8 Gm12579-201ENSMUST00000118040 783 ntBASIC15.54■□□□□ 0.08
Vars2Q3U2A8 Gm11422-201ENSMUST00000118925 1103 ntBASIC15.54■□□□□ 0.08
Vars2Q3U2A8 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Vars2Q3U2A8 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC15.54■□□□□ 0.08
Vars2Q3U2A8 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Vars2Q3U2A8 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vars2Q3U2A8 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Vars2Q3U2A8 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Vars2Q3U2A8 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC15.54■□□□□ 0.08
Vars2Q3U2A8 AC136376.2-201ENSMUST00000228819 490 ntBASIC15.54■□□□□ 0.08
Vars2Q3U2A8 Gm4604-201ENSMUST00000025040 390 ntBASIC15.54■□□□□ 0.08
Vars2Q3U2A8 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Vars2Q3U2A8 Gm5705-201ENSMUST00000066241 711 ntBASIC15.54■□□□□ 0.08
Vars2Q3U2A8 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Vars2Q3U2A8 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vars2Q3U2A8 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vars2Q3U2A8 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Vars2Q3U2A8 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vars2Q3U2A8 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vars2Q3U2A8 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vars2Q3U2A8 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Vars2Q3U2A8 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vars2Q3U2A8 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Vars2Q3U2A8 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vars2Q3U2A8 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vars2Q3U2A8 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Vars2Q3U2A8 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vars2Q3U2A8 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vars2Q3U2A8 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Vars2Q3U2A8 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vars2Q3U2A8 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Vars2Q3U2A8 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vars2Q3U2A8 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vars2Q3U2A8 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vars2Q3U2A8 Gm24231-201ENSMUST00000104315 133 ntBASIC15.53■□□□□ 0.08
Vars2Q3U2A8 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Vars2Q3U2A8 Gm22711-201ENSMUST00000116890 133 ntBASIC15.53■□□□□ 0.08
Vars2Q3U2A8 Gm14274-201ENSMUST00000117182 615 ntBASIC15.53■□□□□ 0.08
Vars2Q3U2A8 Gm14942-201ENSMUST00000119642 336 ntBASIC15.53■□□□□ 0.08
Vars2Q3U2A8 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Vars2Q3U2A8 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC15.53■□□□□ 0.08
Vars2Q3U2A8 Gm8815-201ENSMUST00000173809 620 ntBASIC15.53■□□□□ 0.08
Vars2Q3U2A8 Gm29499-201ENSMUST00000189151 486 ntBASIC15.53■□□□□ 0.08
Vars2Q3U2A8 Gm28329-201ENSMUST00000191208 689 ntBASIC15.53■□□□□ 0.08
Vars2Q3U2A8 Gm29171-201ENSMUST00000191397 486 ntBASIC15.53■□□□□ 0.08
Vars2Q3U2A8 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC15.53■□□□□ 0.08
Vars2Q3U2A8 Gm18460-201ENSMUST00000208088 464 ntBASIC15.53■□□□□ 0.08
Vars2Q3U2A8 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Vars2Q3U2A8 Gm17872-201ENSMUST00000222550 532 ntBASIC15.53■□□□□ 0.08
Vars2Q3U2A8 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vars2Q3U2A8 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Vars2Q3U2A8 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Vars2Q3U2A8 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vars2Q3U2A8 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vars2Q3U2A8 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vars2Q3U2A8 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Vars2Q3U2A8 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vars2Q3U2A8 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vars2Q3U2A8 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vars2Q3U2A8 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Vars2Q3U2A8 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Vars2Q3U2A8 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vars2Q3U2A8 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vars2Q3U2A8 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vars2Q3U2A8 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Vars2Q3U2A8 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Vars2Q3U2A8 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Vars2Q3U2A8 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Vars2Q3U2A8 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC15.52■□□□□ 0.08
Vars2Q3U2A8 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vars2Q3U2A8 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vars2Q3U2A8 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Vars2Q3U2A8 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Vars2Q3U2A8 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vars2Q3U2A8 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vars2Q3U2A8 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Vars2Q3U2A8 Gm12943-201ENSMUST00000119616 210 ntBASIC15.52■□□□□ 0.08
Vars2Q3U2A8 Gm11979-201ENSMUST00000119629 743 ntBASIC15.52■□□□□ 0.08
Vars2Q3U2A8 Gm14913-201ENSMUST00000120011 1093 ntBASIC15.52■□□□□ 0.08
Vars2Q3U2A8 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC15.52■□□□□ 0.08
Vars2Q3U2A8 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Vars2Q3U2A8 AC138604.1-201ENSMUST00000226969 739 ntBASIC15.52■□□□□ 0.08
Vars2Q3U2A8 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Vars2Q3U2A8 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vars2Q3U2A8 Gm5805-201ENSMUST00000072779 456 ntBASIC15.52■□□□□ 0.08
Vars2Q3U2A8 Gm23680-201ENSMUST00000083162 164 ntBASIC15.52■□□□□ 0.08
Vars2Q3U2A8 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Vars2Q3U2A8 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC15.52■□□□□ 0.08
Vars2Q3U2A8 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Vars2Q3U2A8 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Vars2Q3U2A8 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
Vars2Q3U2A8 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vars2Q3U2A8 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vars2Q3U2A8 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Vars2Q3U2A8 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vars2Q3U2A8 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Vars2Q3U2A8 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vars2Q3U2A8 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vars2Q3U2A8 Gm18198-201ENSMUST00000204986 1551 ntBASIC15.51■□□□□ 0.07
Vars2Q3U2A8 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms