Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC11.44□□□□□ -0.58
Ccbe1Q3MI99 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
Ccbe1Q3MI99 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC11.44□□□□□ -0.58
Ccbe1Q3MI99 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Ccbe1Q3MI99 Gm9630-201ENSMUST00000178304 885 ntBASIC11.44□□□□□ -0.58
Ccbe1Q3MI99 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC11.44□□□□□ -0.58
Ccbe1Q3MI99 Gm43474-201ENSMUST00000196415 774 ntBASIC11.44□□□□□ -0.58
Ccbe1Q3MI99 Gm20553-201ENSMUST00000204205 844 ntBASIC11.44□□□□□ -0.58
Ccbe1Q3MI99 AC131187.1-201ENSMUST00000224567 809 ntBASIC11.44□□□□□ -0.58
Ccbe1Q3MI99 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccbe1Q3MI99 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccbe1Q3MI99 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Ccbe1Q3MI99 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccbe1Q3MI99 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccbe1Q3MI99 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Ccbe1Q3MI99 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ccbe1Q3MI99 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.44□□□□□ -0.58
Ccbe1Q3MI99 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccbe1Q3MI99 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC11.44□□□□□ -0.58
Ccbe1Q3MI99 Gm45776-201ENSMUST00000212366 1522 ntBASIC11.44□□□□□ -0.58
Ccbe1Q3MI99 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccbe1Q3MI99 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccbe1Q3MI99 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccbe1Q3MI99 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccbe1Q3MI99 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Ccbe1Q3MI99 Gm5403-201ENSMUST00000117105 2795 ntBASIC11.44□□□□□ -0.58
Ccbe1Q3MI99 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Ccbe1Q3MI99 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccbe1Q3MI99 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccbe1Q3MI99 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccbe1Q3MI99 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccbe1Q3MI99 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccbe1Q3MI99 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccbe1Q3MI99 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccbe1Q3MI99 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ccbe1Q3MI99 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccbe1Q3MI99 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccbe1Q3MI99 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Ccbe1Q3MI99 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ccbe1Q3MI99 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccbe1Q3MI99 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccbe1Q3MI99 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC11.43□□□□□ -0.58
Ccbe1Q3MI99 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ccbe1Q3MI99 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ccbe1Q3MI99 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccbe1Q3MI99 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ccbe1Q3MI99 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Ccbe1Q3MI99 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ccbe1Q3MI99 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccbe1Q3MI99 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC11.43□□□□□ -0.58
Ccbe1Q3MI99 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccbe1Q3MI99 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccbe1Q3MI99 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccbe1Q3MI99 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccbe1Q3MI99 Gm11557-201ENSMUST00000120200 1008 ntBASIC11.43□□□□□ -0.58
Ccbe1Q3MI99 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC11.43□□□□□ -0.58
Ccbe1Q3MI99 Gm6222-201ENSMUST00000120787 396 ntBASIC11.43□□□□□ -0.58
Ccbe1Q3MI99 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Ccbe1Q3MI99 Gm8927-201ENSMUST00000181978 981 ntBASIC11.43□□□□□ -0.58
Ccbe1Q3MI99 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ccbe1Q3MI99 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Ccbe1Q3MI99 Ighv8-7-201ENSMUST00000194349 297 ntBASIC11.43□□□□□ -0.58
Ccbe1Q3MI99 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccbe1Q3MI99 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Ccbe1Q3MI99 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccbe1Q3MI99 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccbe1Q3MI99 Gm3222-201ENSMUST00000071282 990 ntBASIC11.43□□□□□ -0.58
Ccbe1Q3MI99 Mir125a-201ENSMUST00000083545 68 ntBASIC11.43□□□□□ -0.58
Ccbe1Q3MI99 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC11.43□□□□□ -0.58
Ccbe1Q3MI99 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccbe1Q3MI99 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Ccbe1Q3MI99 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccbe1Q3MI99 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccbe1Q3MI99 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccbe1Q3MI99 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ccbe1Q3MI99 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccbe1Q3MI99 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccbe1Q3MI99 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccbe1Q3MI99 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccbe1Q3MI99 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Ccbe1Q3MI99 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Ccbe1Q3MI99 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC11.43□□□□□ -0.58
Ccbe1Q3MI99 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Ccbe1Q3MI99 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccbe1Q3MI99 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ccbe1Q3MI99 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccbe1Q3MI99 Gm17244-201ENSMUST00000192482 3416 ntBASIC11.42□□□□□ -0.58
Ccbe1Q3MI99 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ccbe1Q3MI99 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ccbe1Q3MI99 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccbe1Q3MI99 Gm40655-201ENSMUST00000220802 1880 ntTSL 5 BASIC11.42□□□□□ -0.58
Ccbe1Q3MI99 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccbe1Q3MI99 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccbe1Q3MI99 BC035947-201ENSMUST00000170511 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccbe1Q3MI99 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccbe1Q3MI99 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ccbe1Q3MI99 Gm7340-201ENSMUST00000119729 2752 ntBASIC11.42□□□□□ -0.58
Ccbe1Q3MI99 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Ccbe1Q3MI99 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC11.42□□□□□ -0.58
Ccbe1Q3MI99 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms