Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col9a2Q07643 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col9a2Q07643 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col9a2Q07643 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col9a2Q07643 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col9a2Q07643 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col9a2Q07643 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col9a2Q07643 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.67□□□□□ -0.22
Col9a2Q07643 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col9a2Q07643 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col9a2Q07643 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.66□□□□□ -0.22
Col9a2Q07643 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.66□□□□□ -0.22
Col9a2Q07643 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col9a2Q07643 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col9a2Q07643 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col9a2Q07643 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col9a2Q07643 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col9a2Q07643 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col9a2Q07643 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC13.66□□□□□ -0.22
Col9a2Q07643 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col9a2Q07643 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col9a2Q07643 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC13.66□□□□□ -0.22
Col9a2Q07643 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col9a2Q07643 Gm12217-201ENSMUST00000118858 696 ntBASIC13.66□□□□□ -0.22
Col9a2Q07643 B9d1os-201ENSMUST00000137010 674 ntBASIC13.66□□□□□ -0.22
Col9a2Q07643 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC13.66□□□□□ -0.22
Col9a2Q07643 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC13.66□□□□□ -0.22
Col9a2Q07643 Gm24514-201ENSMUST00000174961 285 ntBASIC13.66□□□□□ -0.22
Col9a2Q07643 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col9a2Q07643 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC13.66□□□□□ -0.22
Col9a2Q07643 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC13.66□□□□□ -0.22
Col9a2Q07643 Gm29787-201ENSMUST00000222129 849 ntBASIC13.66□□□□□ -0.22
Col9a2Q07643 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col9a2Q07643 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Col9a2Q07643 Gm45342-201ENSMUST00000210903 1363 ntBASIC13.66□□□□□ -0.22
Col9a2Q07643 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col9a2Q07643 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC13.66□□□□□ -0.22
Col9a2Q07643 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col9a2Q07643 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.66□□□□□ -0.22
Col9a2Q07643 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Col9a2Q07643 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col9a2Q07643 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col9a2Q07643 Gm5884-201ENSMUST00000036712 1479 ntBASIC13.66□□□□□ -0.22
Col9a2Q07643 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.66□□□□□ -0.22
Col9a2Q07643 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col9a2Q07643 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Col9a2Q07643 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Col9a2Q07643 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col9a2Q07643 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Col9a2Q07643 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col9a2Q07643 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col9a2Q07643 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC13.65□□□□□ -0.22
Col9a2Q07643 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Col9a2Q07643 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col9a2Q07643 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Col9a2Q07643 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col9a2Q07643 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col9a2Q07643 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Col9a2Q07643 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col9a2Q07643 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col9a2Q07643 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col9a2Q07643 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC13.65□□□□□ -0.22
Col9a2Q07643 Gm26361-201ENSMUST00000158868 186 ntBASIC13.65□□□□□ -0.22
Col9a2Q07643 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Col9a2Q07643 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC13.65□□□□□ -0.22
Col9a2Q07643 Gm25732-201ENSMUST00000175168 60 ntBASIC13.65□□□□□ -0.22
Col9a2Q07643 Gm27023-201ENSMUST00000182372 285 ntBASIC13.65□□□□□ -0.22
Col9a2Q07643 Rps4l-202ENSMUST00000204242 789 ntBASIC13.65□□□□□ -0.22
Col9a2Q07643 Gm5363-201ENSMUST00000211927 938 ntBASIC13.65□□□□□ -0.22
Col9a2Q07643 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col9a2Q07643 Gm10312-201ENSMUST00000078515 489 ntBASIC13.65□□□□□ -0.22
Col9a2Q07643 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col9a2Q07643 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col9a2Q07643 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col9a2Q07643 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col9a2Q07643 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Col9a2Q07643 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Col9a2Q07643 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col9a2Q07643 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col9a2Q07643 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col9a2Q07643 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Col9a2Q07643 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col9a2Q07643 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col9a2Q07643 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Col9a2Q07643 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
Col9a2Q07643 Retreg1-206ENSMUST00000228306 1430 ntBASIC13.64□□□□□ -0.23
Col9a2Q07643 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col9a2Q07643 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col9a2Q07643 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Col9a2Q07643 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col9a2Q07643 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col9a2Q07643 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col9a2Q07643 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Col9a2Q07643 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC13.64□□□□□ -0.23
Col9a2Q07643 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Col9a2Q07643 Gm14130-201ENSMUST00000118417 987 ntBASIC13.64□□□□□ -0.23
Col9a2Q07643 Gm13996-201ENSMUST00000118456 430 ntBASIC13.64□□□□□ -0.23
Col9a2Q07643 Gm4993-201ENSMUST00000118719 1174 ntBASIC13.64□□□□□ -0.23
Col9a2Q07643 Gm13665-201ENSMUST00000120830 528 ntBASIC13.64□□□□□ -0.23
Col9a2Q07643 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms