Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 Gm8738-201ENSMUST00000172606 329 ntBASIC11.11□□□□□ -0.63
Thbs3Q05895 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC11.11□□□□□ -0.63
Thbs3Q05895 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC11.11□□□□□ -0.63
Thbs3Q05895 Gm5186-201ENSMUST00000218781 920 ntBASIC11.11□□□□□ -0.63
Thbs3Q05895 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.11□□□□□ -0.63
Thbs3Q05895 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC11.11□□□□□ -0.63
Thbs3Q05895 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC11.11□□□□□ -0.63
Thbs3Q05895 AC140451.2-201ENSMUST00000228030 664 ntBASIC11.11□□□□□ -0.63
Thbs3Q05895 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Thbs3Q05895 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Thbs3Q05895 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.11□□□□□ -0.63
Thbs3Q05895 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Thbs3Q05895 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.11□□□□□ -0.63
Thbs3Q05895 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Thbs3Q05895 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Thbs3Q05895 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Thbs3Q05895 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Thbs3Q05895 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Thbs3Q05895 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Thbs3Q05895 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Thbs3Q05895 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Thbs3Q05895 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Thbs3Q05895 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Thbs3Q05895 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Thbs3Q05895 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Thbs3Q05895 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Thbs3Q05895 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Thbs3Q05895 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Thbs3Q05895 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Thbs3Q05895 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Thbs3Q05895 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Thbs3Q05895 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Thbs3Q05895 Gm4735-201ENSMUST00000138679 1302 ntBASIC11.1□□□□□ -0.63
Thbs3Q05895 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.1□□□□□ -0.63
Thbs3Q05895 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Thbs3Q05895 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Thbs3Q05895 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Thbs3Q05895 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.1□□□□□ -0.63
Thbs3Q05895 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Thbs3Q05895 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Thbs3Q05895 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.1□□□□□ -0.63
Thbs3Q05895 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Thbs3Q05895 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Thbs3Q05895 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Thbs3Q05895 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Thbs3Q05895 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Thbs3Q05895 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Thbs3Q05895 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Thbs3Q05895 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Thbs3Q05895 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Thbs3Q05895 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Thbs3Q05895 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC11.1□□□□□ -0.63
Thbs3Q05895 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC11.1□□□□□ -0.63
Thbs3Q05895 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC11.1□□□□□ -0.63
Thbs3Q05895 Gm37008-201ENSMUST00000195712 319 ntBASIC11.1□□□□□ -0.63
Thbs3Q05895 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC11.1□□□□□ -0.63
Thbs3Q05895 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC11.1□□□□□ -0.63
Thbs3Q05895 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.1□□□□□ -0.63
Thbs3Q05895 AC153962.4-201ENSMUST00000217878 242 ntBASIC11.1□□□□□ -0.63
Thbs3Q05895 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Thbs3Q05895 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Thbs3Q05895 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Thbs3Q05895 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Thbs3Q05895 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Thbs3Q05895 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Thbs3Q05895 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Thbs3Q05895 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Thbs3Q05895 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Thbs3Q05895 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Thbs3Q05895 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Thbs3Q05895 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Thbs3Q05895 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Thbs3Q05895 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Thbs3Q05895 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Thbs3Q05895 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Thbs3Q05895 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Thbs3Q05895 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Thbs3Q05895 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Thbs3Q05895 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.1□□□□□ -0.63
Thbs3Q05895 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Thbs3Q05895 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Thbs3Q05895 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Thbs3Q05895 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Thbs3Q05895 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Thbs3Q05895 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Thbs3Q05895 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Thbs3Q05895 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Thbs3Q05895 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Thbs3Q05895 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Thbs3Q05895 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Thbs3Q05895 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Thbs3Q05895 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Thbs3Q05895 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Thbs3Q05895 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Thbs3Q05895 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Thbs3Q05895 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Thbs3Q05895 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Thbs3Q05895 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Thbs3Q05895 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Thbs3Q05895 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms