Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
GabpaQ00422 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GabpaQ00422 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
GabpaQ00422 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
GabpaQ00422 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
GabpaQ00422 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GabpaQ00422 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
GabpaQ00422 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
GabpaQ00422 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
GabpaQ00422 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GabpaQ00422 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
GabpaQ00422 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GabpaQ00422 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GabpaQ00422 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
GabpaQ00422 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.31□□□□□ -0.12
GabpaQ00422 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
GabpaQ00422 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
GabpaQ00422 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.31□□□□□ -0.12
GabpaQ00422 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.31□□□□□ -0.12
GabpaQ00422 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GabpaQ00422 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GabpaQ00422 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC14.31□□□□□ -0.12
GabpaQ00422 Gm13296-201ENSMUST00000117854 997 ntBASIC14.31□□□□□ -0.12
GabpaQ00422 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
GabpaQ00422 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC14.31□□□□□ -0.12
GabpaQ00422 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC14.31□□□□□ -0.12
GabpaQ00422 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC14.31□□□□□ -0.12
GabpaQ00422 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
GabpaQ00422 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GabpaQ00422 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GabpaQ00422 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GabpaQ00422 Gm44851-201ENSMUST00000205735 2309 ntBASIC14.31□□□□□ -0.12
GabpaQ00422 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GabpaQ00422 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
GabpaQ00422 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GabpaQ00422 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GabpaQ00422 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GabpaQ00422 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GabpaQ00422 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
GabpaQ00422 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GabpaQ00422 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GabpaQ00422 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GabpaQ00422 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
GabpaQ00422 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
GabpaQ00422 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
GabpaQ00422 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
GabpaQ00422 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GabpaQ00422 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
GabpaQ00422 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
GabpaQ00422 Gm5638-201ENSMUST00000118618 1258 ntBASIC14.3□□□□□ -0.12
GabpaQ00422 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
GabpaQ00422 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
GabpaQ00422 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
GabpaQ00422 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
GabpaQ00422 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GabpaQ00422 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC14.3□□□□□ -0.12
GabpaQ00422 Gm32999-201ENSMUST00000192693 562 ntBASIC14.3□□□□□ -0.12
GabpaQ00422 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC14.3□□□□□ -0.12
GabpaQ00422 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
GabpaQ00422 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC14.3□□□□□ -0.12
GabpaQ00422 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
GabpaQ00422 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GabpaQ00422 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
GabpaQ00422 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GabpaQ00422 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GabpaQ00422 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GabpaQ00422 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
GabpaQ00422 Gm43289-201ENSMUST00000200537 1475 ntBASIC14.3□□□□□ -0.12
GabpaQ00422 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
GabpaQ00422 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
GabpaQ00422 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
GabpaQ00422 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GabpaQ00422 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GabpaQ00422 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GabpaQ00422 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
GabpaQ00422 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GabpaQ00422 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
GabpaQ00422 Gm43858-201ENSMUST00000199418 1778 ntBASIC14.29□□□□□ -0.12
GabpaQ00422 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GabpaQ00422 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
GabpaQ00422 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GabpaQ00422 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
GabpaQ00422 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GabpaQ00422 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
GabpaQ00422 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GabpaQ00422 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GabpaQ00422 Gm37666-201ENSMUST00000194110 866 ntBASIC14.29□□□□□ -0.12
GabpaQ00422 Gm19187-201ENSMUST00000206781 892 ntBASIC14.29□□□□□ -0.12
GabpaQ00422 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC14.29□□□□□ -0.12
GabpaQ00422 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
GabpaQ00422 Gm45598-202ENSMUST00000210719 986 ntBASIC14.29□□□□□ -0.12
GabpaQ00422 Gm10371-202ENSMUST00000228010 1081 ntBASIC14.29□□□□□ -0.12
GabpaQ00422 Gm8385-201ENSMUST00000058999 643 ntBASIC14.29□□□□□ -0.12
GabpaQ00422 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
GabpaQ00422 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
GabpaQ00422 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
GabpaQ00422 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC14.29□□□□□ -0.12
GabpaQ00422 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC14.29□□□□□ -0.12
GabpaQ00422 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
GabpaQ00422 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms