Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Scn1bP97952 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Scn1bP97952 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.55□□□□□ -0.56
Scn1bP97952 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Scn1bP97952 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Scn1bP97952 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.55□□□□□ -0.56
Scn1bP97952 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC11.55□□□□□ -0.56
Scn1bP97952 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Scn1bP97952 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC11.55□□□□□ -0.56
Scn1bP97952 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Scn1bP97952 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC11.55□□□□□ -0.56
Scn1bP97952 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Scn1bP97952 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC11.55□□□□□ -0.56
Scn1bP97952 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Scn1bP97952 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Scn1bP97952 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Scn1bP97952 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.55□□□□□ -0.56
Scn1bP97952 Gm38037-201ENSMUST00000192600 1624 ntBASIC11.55□□□□□ -0.56
Scn1bP97952 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Scn1bP97952 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Scn1bP97952 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Scn1bP97952 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Scn1bP97952 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.55□□□□□ -0.56
Scn1bP97952 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Scn1bP97952 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Scn1bP97952 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Scn1bP97952 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Scn1bP97952 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Scn1bP97952 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Scn1bP97952 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC11.55□□□□□ -0.56
Scn1bP97952 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Scn1bP97952 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Scn1bP97952 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Scn1bP97952 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Scn1bP97952 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Scn1bP97952 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Scn1bP97952 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Scn1bP97952 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Scn1bP97952 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Scn1bP97952 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Scn1bP97952 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Scn1bP97952 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC11.54□□□□□ -0.56
Scn1bP97952 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Scn1bP97952 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Scn1bP97952 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Scn1bP97952 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Scn1bP97952 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Scn1bP97952 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Scn1bP97952 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC11.54□□□□□ -0.56
Scn1bP97952 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Scn1bP97952 Gm13886-201ENSMUST00000117876 1183 ntBASIC11.54□□□□□ -0.56
Scn1bP97952 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC11.54□□□□□ -0.56
Scn1bP97952 Cd63-ps-201ENSMUST00000145417 875 ntBASIC11.54□□□□□ -0.56
Scn1bP97952 Gm4804-201ENSMUST00000182234 999 ntBASIC11.54□□□□□ -0.56
Scn1bP97952 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Scn1bP97952 AC139382.1-201ENSMUST00000221402 498 ntBASIC11.54□□□□□ -0.56
Scn1bP97952 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Scn1bP97952 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Scn1bP97952 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Scn1bP97952 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Scn1bP97952 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Scn1bP97952 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Scn1bP97952 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Scn1bP97952 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Scn1bP97952 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Scn1bP97952 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Scn1bP97952 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Scn1bP97952 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Scn1bP97952 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Scn1bP97952 Gm15222-202ENSMUST00000228667 1726 ntBASIC11.54□□□□□ -0.56
Scn1bP97952 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Scn1bP97952 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.54□□□□□ -0.56
Scn1bP97952 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Scn1bP97952 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Scn1bP97952 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Scn1bP97952 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Scn1bP97952 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Scn1bP97952 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Scn1bP97952 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Scn1bP97952 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Scn1bP97952 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scn1bP97952 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scn1bP97952 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scn1bP97952 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Scn1bP97952 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scn1bP97952 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scn1bP97952 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Scn1bP97952 Gm5859-201ENSMUST00000165401 2324 ntBASIC11.53□□□□□ -0.56
Scn1bP97952 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scn1bP97952 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Scn1bP97952 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scn1bP97952 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.53□□□□□ -0.56
Scn1bP97952 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scn1bP97952 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.53□□□□□ -0.56
Scn1bP97952 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Scn1bP97952 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Scn1bP97952 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC11.53□□□□□ -0.56
Scn1bP97952 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.53□□□□□ -0.56
Scn1bP97952 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Scn1bP97952 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms