Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CiitaP79621 AC093022.1-201ENSMUST00000226949 1072 ntBASIC13.68□□□□□ -0.22
CiitaP79621 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CiitaP79621 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CiitaP79621 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CiitaP79621 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CiitaP79621 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
CiitaP79621 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CiitaP79621 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CiitaP79621 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CiitaP79621 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CiitaP79621 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CiitaP79621 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CiitaP79621 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CiitaP79621 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CiitaP79621 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CiitaP79621 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC13.67□□□□□ -0.22
CiitaP79621 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CiitaP79621 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CiitaP79621 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CiitaP79621 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.67□□□□□ -0.22
CiitaP79621 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CiitaP79621 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CiitaP79621 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CiitaP79621 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CiitaP79621 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
CiitaP79621 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CiitaP79621 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CiitaP79621 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CiitaP79621 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CiitaP79621 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CiitaP79621 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC13.67□□□□□ -0.22
CiitaP79621 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CiitaP79621 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
CiitaP79621 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC13.67□□□□□ -0.22
CiitaP79621 Gm4959-201ENSMUST00000197271 1044 ntBASIC13.67□□□□□ -0.22
CiitaP79621 Gm42937-201ENSMUST00000197360 752 ntBASIC13.67□□□□□ -0.22
CiitaP79621 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC13.67□□□□□ -0.22
CiitaP79621 AC126253.1-202ENSMUST00000226732 835 ntBASIC13.67□□□□□ -0.22
CiitaP79621 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CiitaP79621 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
CiitaP79621 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CiitaP79621 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
CiitaP79621 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CiitaP79621 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
CiitaP79621 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CiitaP79621 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CiitaP79621 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CiitaP79621 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CiitaP79621 Gm10782-202ENSMUST00000223775 1480 ntBASIC13.67□□□□□ -0.22
CiitaP79621 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CiitaP79621 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CiitaP79621 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CiitaP79621 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CiitaP79621 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CiitaP79621 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CiitaP79621 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CiitaP79621 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC13.66□□□□□ -0.22
CiitaP79621 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.66□□□□□ -0.22
CiitaP79621 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CiitaP79621 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CiitaP79621 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC13.66□□□□□ -0.22
CiitaP79621 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CiitaP79621 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CiitaP79621 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CiitaP79621 Gm15276-201ENSMUST00000145953 498 ntBASIC13.66□□□□□ -0.22
CiitaP79621 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC13.66□□□□□ -0.22
CiitaP79621 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CiitaP79621 Gm9022-201ENSMUST00000182482 992 ntBASIC13.66□□□□□ -0.22
CiitaP79621 Gm5869-201ENSMUST00000200248 1257 ntBASIC13.66□□□□□ -0.22
CiitaP79621 Gm44967-201ENSMUST00000207047 631 ntBASIC13.66□□□□□ -0.22
CiitaP79621 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CiitaP79621 AC154222.2-201ENSMUST00000225848 607 ntBASIC13.66□□□□□ -0.22
CiitaP79621 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CiitaP79621 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CiitaP79621 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CiitaP79621 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CiitaP79621 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CiitaP79621 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CiitaP79621 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CiitaP79621 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC13.66□□□□□ -0.22
CiitaP79621 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CiitaP79621 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CiitaP79621 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CiitaP79621 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CiitaP79621 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CiitaP79621 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CiitaP79621 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CiitaP79621 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CiitaP79621 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CiitaP79621 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CiitaP79621 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CiitaP79621 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CiitaP79621 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CiitaP79621 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC13.65□□□□□ -0.22
CiitaP79621 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CiitaP79621 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CiitaP79621 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CiitaP79621 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CiitaP79621 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms