Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Shox2P70390 Gm43963-201ENSMUST00000203466 2488 ntBASIC12.45□□□□□ -0.42
Shox2P70390 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Shox2P70390 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Shox2P70390 H2af-ps-201ENSMUST00000119066 295 ntBASIC12.45□□□□□ -0.42
Shox2P70390 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.45□□□□□ -0.42
Shox2P70390 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Shox2P70390 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Shox2P70390 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Shox2P70390 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shox2P70390 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.45□□□□□ -0.42
Shox2P70390 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.45□□□□□ -0.42
Shox2P70390 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shox2P70390 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shox2P70390 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shox2P70390 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC12.45□□□□□ -0.42
Shox2P70390 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shox2P70390 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Shox2P70390 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.45□□□□□ -0.42
Shox2P70390 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shox2P70390 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shox2P70390 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shox2P70390 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Shox2P70390 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.45□□□□□ -0.42
Shox2P70390 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Shox2P70390 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.45□□□□□ -0.42
Shox2P70390 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Shox2P70390 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Shox2P70390 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shox2P70390 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Shox2P70390 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shox2P70390 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.45□□□□□ -0.42
Shox2P70390 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Shox2P70390 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Shox2P70390 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shox2P70390 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
Shox2P70390 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shox2P70390 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.44□□□□□ -0.42
Shox2P70390 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Shox2P70390 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shox2P70390 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.44□□□□□ -0.42
Shox2P70390 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Shox2P70390 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.44□□□□□ -0.42
Shox2P70390 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shox2P70390 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shox2P70390 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.44□□□□□ -0.42
Shox2P70390 AC124397.2-201ENSMUST00000225575 2215 ntBASIC12.44□□□□□ -0.42
Shox2P70390 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shox2P70390 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shox2P70390 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC12.44□□□□□ -0.42
Shox2P70390 Gm14921-201ENSMUST00000118643 908 ntBASIC12.44□□□□□ -0.42
Shox2P70390 Gm12384-201ENSMUST00000119228 919 ntBASIC12.44□□□□□ -0.42
Shox2P70390 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.44□□□□□ -0.42
Shox2P70390 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Shox2P70390 Gm24158-201ENSMUST00000175263 71 ntBASIC12.44□□□□□ -0.42
Shox2P70390 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shox2P70390 Gm25144-201ENSMUST00000179561 110 ntBASIC12.44□□□□□ -0.42
Shox2P70390 Gm25352-201ENSMUST00000179815 110 ntBASIC12.44□□□□□ -0.42
Shox2P70390 Gm27321-201ENSMUST00000185021 205 ntBASIC12.44□□□□□ -0.42
Shox2P70390 Gm43474-201ENSMUST00000196415 774 ntBASIC12.44□□□□□ -0.42
Shox2P70390 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shox2P70390 Gm5312-201ENSMUST00000203728 547 ntBASIC12.44□□□□□ -0.42
Shox2P70390 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
Shox2P70390 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.44□□□□□ -0.42
Shox2P70390 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shox2P70390 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shox2P70390 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Shox2P70390 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shox2P70390 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Shox2P70390 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shox2P70390 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC12.44□□□□□ -0.42
Shox2P70390 Btrc-209ENSMUST00000224478 2194 ntBASIC12.44□□□□□ -0.42
Shox2P70390 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Shox2P70390 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shox2P70390 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Shox2P70390 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shox2P70390 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shox2P70390 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shox2P70390 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shox2P70390 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
Shox2P70390 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.44□□□□□ -0.42
Shox2P70390 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.44□□□□□ -0.42
Shox2P70390 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shox2P70390 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Shox2P70390 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shox2P70390 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shox2P70390 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Shox2P70390 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Shox2P70390 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Shox2P70390 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shox2P70390 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shox2P70390 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shox2P70390 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Shox2P70390 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Shox2P70390 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Shox2P70390 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shox2P70390 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shox2P70390 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shox2P70390 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Shox2P70390 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms