Protein–RNA interactions for Protein: P70340

Smad1, Mothers against decapentaplegic homolog 1, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad1P70340 Gm29705-201ENSMUST00000212598 474 ntBASIC13.04□□□□□ -0.32
Smad1P70340 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smad1P70340 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smad1P70340 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smad1P70340 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smad1P70340 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smad1P70340 Gm10339-203ENSMUST00000225409 1671 ntBASIC13.04□□□□□ -0.32
Smad1P70340 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Smad1P70340 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smad1P70340 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Smad1P70340 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smad1P70340 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smad1P70340 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smad1P70340 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Smad1P70340 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smad1P70340 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smad1P70340 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smad1P70340 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smad1P70340 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC13.03□□□□□ -0.32
Smad1P70340 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smad1P70340 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Smad1P70340 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Smad1P70340 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Smad1P70340 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
Smad1P70340 Gm10156-201ENSMUST00000122364 462 ntBASIC13.03□□□□□ -0.32
Smad1P70340 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC13.03□□□□□ -0.32
Smad1P70340 Proscos-202ENSMUST00000178990 666 ntBASIC13.03□□□□□ -0.32
Smad1P70340 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Smad1P70340 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC13.03□□□□□ -0.32
Smad1P70340 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Smad1P70340 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC13.03□□□□□ -0.32
Smad1P70340 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
Smad1P70340 Gm45930-201ENSMUST00000221330 292 ntBASIC13.03□□□□□ -0.32
Smad1P70340 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smad1P70340 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smad1P70340 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smad1P70340 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.03□□□□□ -0.32
Smad1P70340 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smad1P70340 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
Smad1P70340 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smad1P70340 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Smad1P70340 Gm43045-201ENSMUST00000198725 2095 ntBASIC13.03□□□□□ -0.32
Smad1P70340 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
Smad1P70340 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smad1P70340 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smad1P70340 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Smad1P70340 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Smad1P70340 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC13.02□□□□□ -0.32
Smad1P70340 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Smad1P70340 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Smad1P70340 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.32
Smad1P70340 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Smad1P70340 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Smad1P70340 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.02□□□□□ -0.32
Smad1P70340 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC13.02□□□□□ -0.32
Smad1P70340 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Smad1P70340 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Smad1P70340 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Smad1P70340 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Smad1P70340 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smad1P70340 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Smad1P70340 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Smad1P70340 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Smad1P70340 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Smad1P70340 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Smad1P70340 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC13.02□□□□□ -0.33
Smad1P70340 Gm27516-201ENSMUST00000184237 98 ntBASIC13.02□□□□□ -0.33
Smad1P70340 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC13.02□□□□□ -0.33
Smad1P70340 Gm37466-201ENSMUST00000195692 652 ntBASIC13.02□□□□□ -0.33
Smad1P70340 Gm17823-201ENSMUST00000217830 1006 ntBASIC13.02□□□□□ -0.33
Smad1P70340 AC133598.1-201ENSMUST00000224327 660 ntBASIC13.02□□□□□ -0.33
Smad1P70340 AC155237.1-201ENSMUST00000226196 1279 ntBASIC13.02□□□□□ -0.33
Smad1P70340 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.02□□□□□ -0.33
Smad1P70340 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smad1P70340 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smad1P70340 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smad1P70340 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smad1P70340 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.02□□□□□ -0.33
Smad1P70340 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Smad1P70340 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smad1P70340 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC13.02□□□□□ -0.33
Smad1P70340 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Smad1P70340 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smad1P70340 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smad1P70340 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smad1P70340 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smad1P70340 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.02□□□□□ -0.33
Smad1P70340 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smad1P70340 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Smad1P70340 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smad1P70340 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Smad1P70340 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Smad1P70340 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Smad1P70340 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.01□□□□□ -0.33
Smad1P70340 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smad1P70340 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smad1P70340 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smad1P70340 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smad1P70340 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.01□□□□□ -0.33
Smad1P70340 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms