Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Pdlim4P70271 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Pdlim4P70271 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pdlim4P70271 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Pdlim4P70271 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC10.55□□□□□ -0.72
Pdlim4P70271 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Pdlim4P70271 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pdlim4P70271 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
Pdlim4P70271 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Pdlim4P70271 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pdlim4P70271 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC10.55□□□□□ -0.72
Pdlim4P70271 Gm7029-201ENSMUST00000173226 450 ntBASIC10.55□□□□□ -0.72
Pdlim4P70271 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Pdlim4P70271 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Pdlim4P70271 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Pdlim4P70271 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC10.55□□□□□ -0.72
Pdlim4P70271 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC10.55□□□□□ -0.72
Pdlim4P70271 Gm43416-201ENSMUST00000201916 1015 ntBASIC10.55□□□□□ -0.72
Pdlim4P70271 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC10.55□□□□□ -0.72
Pdlim4P70271 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pdlim4P70271 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Pdlim4P70271 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pdlim4P70271 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Pdlim4P70271 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pdlim4P70271 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC10.55□□□□□ -0.72
Pdlim4P70271 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pdlim4P70271 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pdlim4P70271 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pdlim4P70271 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pdlim4P70271 Gm10176-201ENSMUST00000159707 2264 ntBASIC10.55□□□□□ -0.72
Pdlim4P70271 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pdlim4P70271 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pdlim4P70271 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pdlim4P70271 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pdlim4P70271 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pdlim4P70271 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pdlim4P70271 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC10.55□□□□□ -0.72
Pdlim4P70271 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pdlim4P70271 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pdlim4P70271 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pdlim4P70271 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC10.54□□□□□ -0.72
Pdlim4P70271 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pdlim4P70271 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pdlim4P70271 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC10.54□□□□□ -0.72
Pdlim4P70271 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Pdlim4P70271 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pdlim4P70271 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pdlim4P70271 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Pdlim4P70271 Gm17435-202ENSMUST00000212699 1998 ntBASIC10.54□□□□□ -0.72
Pdlim4P70271 Gm37014-201ENSMUST00000194723 2253 ntBASIC10.54□□□□□ -0.72
Pdlim4P70271 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC10.54□□□□□ -0.72
Pdlim4P70271 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pdlim4P70271 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pdlim4P70271 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC10.54□□□□□ -0.72
Pdlim4P70271 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC10.54□□□□□ -0.72
Pdlim4P70271 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Pdlim4P70271 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Pdlim4P70271 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Pdlim4P70271 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
Pdlim4P70271 Gm14704-201ENSMUST00000120300 874 ntBASIC10.54□□□□□ -0.72
Pdlim4P70271 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC10.54□□□□□ -0.72
Pdlim4P70271 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Pdlim4P70271 Snora78-201ENSMUST00000158630 128 ntBASIC10.54□□□□□ -0.72
Pdlim4P70271 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pdlim4P70271 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC10.54□□□□□ -0.72
Pdlim4P70271 Gm5370-201ENSMUST00000187187 574 ntBASIC10.54□□□□□ -0.72
Pdlim4P70271 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Pdlim4P70271 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Pdlim4P70271 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pdlim4P70271 AC138604.1-201ENSMUST00000226969 739 ntBASIC10.54□□□□□ -0.72
Pdlim4P70271 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pdlim4P70271 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pdlim4P70271 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pdlim4P70271 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pdlim4P70271 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pdlim4P70271 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pdlim4P70271 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pdlim4P70271 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Pdlim4P70271 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Pdlim4P70271 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC10.54□□□□□ -0.72
Pdlim4P70271 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pdlim4P70271 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pdlim4P70271 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Pdlim4P70271 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pdlim4P70271 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pdlim4P70271 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pdlim4P70271 Gm5620-201ENSMUST00000077991 1348 ntBASIC10.54□□□□□ -0.72
Pdlim4P70271 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Pdlim4P70271 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pdlim4P70271 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pdlim4P70271 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pdlim4P70271 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pdlim4P70271 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pdlim4P70271 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pdlim4P70271 Dctn4-202ENSMUST00000223590 1530 ntBASIC10.53□□□□□ -0.72
Pdlim4P70271 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Pdlim4P70271 AC122840.1-201ENSMUST00000220915 3334 ntBASIC10.53□□□□□ -0.72
Pdlim4P70271 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC10.53□□□□□ -0.72
Pdlim4P70271 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pdlim4P70271 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms