Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC9□□□□□ -0.97
Rpl39P62892 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Rpl39P62892 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Rpl39P62892 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC9□□□□□ -0.97
Rpl39P62892 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC9□□□□□ -0.97
Rpl39P62892 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC9□□□□□ -0.97
Rpl39P62892 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Rpl39P62892 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Rpl39P62892 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Rpl39P62892 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Rpl39P62892 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Rpl39P62892 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC9□□□□□ -0.97
Rpl39P62892 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Rpl39P62892 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC9□□□□□ -0.97
Rpl39P62892 Fgf17-202ENSMUST00000227123 1336 ntBASIC9□□□□□ -0.97
Rpl39P62892 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Rpl39P62892 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Rpl39P62892 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC9□□□□□ -0.97
Rpl39P62892 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC9□□□□□ -0.97
Rpl39P62892 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Rpl39P62892 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC9□□□□□ -0.97
Rpl39P62892 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC9□□□□□ -0.97
Rpl39P62892 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Rpl39P62892 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Rpl39P62892 Gm26684-202ENSMUST00000228229 8257 ntBASIC9□□□□□ -0.97
Rpl39P62892 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Rpl39P62892 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Rpl39P62892 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Rpl39P62892 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Rpl39P62892 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Rpl39P62892 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC8.99□□□□□ -0.97
Rpl39P62892 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Rpl39P62892 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC8.99□□□□□ -0.97
Rpl39P62892 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Rpl39P62892 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC8.99□□□□□ -0.97
Rpl39P62892 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Rpl39P62892 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Rpl39P62892 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Rpl39P62892 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Rpl39P62892 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Rpl39P62892 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Rpl39P62892 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Rpl39P62892 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
Rpl39P62892 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Rpl39P62892 Gm5303-201ENSMUST00000117943 1252 ntBASIC8.99□□□□□ -0.97
Rpl39P62892 Gm13453-201ENSMUST00000118708 357 ntBASIC8.99□□□□□ -0.97
Rpl39P62892 Gm13813-201ENSMUST00000120998 787 ntBASIC8.99□□□□□ -0.97
Rpl39P62892 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Rpl39P62892 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Rpl39P62892 Gm9522-201ENSMUST00000182394 926 ntBASIC8.99□□□□□ -0.97
Rpl39P62892 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Rpl39P62892 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Rpl39P62892 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Rpl39P62892 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Rpl39P62892 AC135669.1-202ENSMUST00000216742 540 ntBASIC8.99□□□□□ -0.97
Rpl39P62892 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Rpl39P62892 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Rpl39P62892 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Rpl39P62892 Gm26035-201ENSMUST00000083065 308 ntBASIC8.99□□□□□ -0.97
Rpl39P62892 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Rpl39P62892 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Rpl39P62892 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Rpl39P62892 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Rpl39P62892 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC8.99□□□□□ -0.97
Rpl39P62892 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Rpl39P62892 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC8.99□□□□□ -0.97
Rpl39P62892 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC8.99□□□□□ -0.97
Rpl39P62892 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Rpl39P62892 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC8.99□□□□□ -0.97
Rpl39P62892 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Rpl39P62892 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Rpl39P62892 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Rpl39P62892 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Rpl39P62892 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC8.99□□□□□ -0.97
Rpl39P62892 Abhd6-203ENSMUST00000225234 1958 ntBASIC8.99□□□□□ -0.97
Rpl39P62892 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Rpl39P62892 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC8.99□□□□□ -0.97
Rpl39P62892 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Rpl39P62892 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rpl39P62892 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC8.98□□□□□ -0.97
Rpl39P62892 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Rpl39P62892 Arhgef3-204ENSMUST00000225949 3198 ntBASIC8.98□□□□□ -0.97
Rpl39P62892 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC8.98□□□□□ -0.97
Rpl39P62892 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Rpl39P62892 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rpl39P62892 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rpl39P62892 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rpl39P62892 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rpl39P62892 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rpl39P62892 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Rpl39P62892 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Rpl39P62892 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC8.98□□□□□ -0.97
Rpl39P62892 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rpl39P62892 Gm11978-201ENSMUST00000122315 466 ntBASIC8.98□□□□□ -0.97
Rpl39P62892 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Rpl39P62892 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC8.98□□□□□ -0.97
Rpl39P62892 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC8.98□□□□□ -0.97
Rpl39P62892 Gm22175-201ENSMUST00000175007 78 ntBASIC8.98□□□□□ -0.97
Rpl39P62892 Gm9630-201ENSMUST00000178304 885 ntBASIC8.98□□□□□ -0.97
Rpl39P62892 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC8.98□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms