Protein–RNA interactions for Protein: P62812

Gabra1, Gamma-aminobutyric acid receptor subunit alpha-1, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabra1P62812 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Gabra1P62812 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC10.63□□□□□ -0.71
Gabra1P62812 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Gabra1P62812 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Gabra1P62812 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Gabra1P62812 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Gabra1P62812 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Gabra1P62812 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Gabra1P62812 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Gabra1P62812 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Gabra1P62812 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Gabra1P62812 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Gabra1P62812 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Gabra1P62812 Gm45776-201ENSMUST00000212366 1522 ntBASIC10.63□□□□□ -0.71
Gabra1P62812 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Gabra1P62812 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Gabra1P62812 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Gabra1P62812 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Gabra1P62812 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Gabra1P62812 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Gabra1P62812 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Gabra1P62812 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Gabra1P62812 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC10.62□□□□□ -0.71
Gabra1P62812 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Gabra1P62812 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Gabra1P62812 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Gabra1P62812 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Gabra1P62812 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Gabra1P62812 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC10.62□□□□□ -0.71
Gabra1P62812 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Gabra1P62812 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Gabra1P62812 Gm6211-201ENSMUST00000147973 4275 ntBASIC10.62□□□□□ -0.71
Gabra1P62812 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC10.62□□□□□ -0.71
Gabra1P62812 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Gabra1P62812 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Gabra1P62812 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Gabra1P62812 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Gabra1P62812 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
Gabra1P62812 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC10.62□□□□□ -0.71
Gabra1P62812 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC10.62□□□□□ -0.71
Gabra1P62812 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC10.62□□□□□ -0.71
Gabra1P62812 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Gabra1P62812 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Gabra1P62812 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Gabra1P62812 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Gabra1P62812 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Gabra1P62812 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Gabra1P62812 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Gabra1P62812 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Gabra1P62812 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Gabra1P62812 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC10.62□□□□□ -0.71
Gabra1P62812 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Gabra1P62812 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Gabra1P62812 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Gabra1P62812 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Gabra1P62812 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Gabra1P62812 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Gabra1P62812 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC10.62□□□□□ -0.71
Gabra1P62812 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Gabra1P62812 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Gabra1P62812 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Gabra1P62812 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Gabra1P62812 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Gabra1P62812 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Gabra1P62812 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Gabra1P62812 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Gabra1P62812 Gm9544-201ENSMUST00000223349 2482 ntBASIC10.61□□□□□ -0.71
Gabra1P62812 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Gabra1P62812 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Gabra1P62812 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Gabra1P62812 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Gabra1P62812 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC10.61□□□□□ -0.71
Gabra1P62812 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC10.61□□□□□ -0.71
Gabra1P62812 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
Gabra1P62812 Gm7774-201ENSMUST00000200064 533 ntBASIC10.61□□□□□ -0.71
Gabra1P62812 AC159114.1-201ENSMUST00000220349 266 ntBASIC10.61□□□□□ -0.71
Gabra1P62812 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Gabra1P62812 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Gabra1P62812 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Gabra1P62812 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Gabra1P62812 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Gabra1P62812 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Gabra1P62812 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Gabra1P62812 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC10.61□□□□□ -0.71
Gabra1P62812 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Gabra1P62812 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Gabra1P62812 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Gabra1P62812 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Gabra1P62812 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC10.61□□□□□ -0.71
Gabra1P62812 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC10.61□□□□□ -0.71
Gabra1P62812 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Gabra1P62812 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Gabra1P62812 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Gabra1P62812 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Gabra1P62812 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Gabra1P62812 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Gabra1P62812 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Gabra1P62812 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Gabra1P62812 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Gabra1P62812 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms